Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.281691
Sfrp1
secreted frizzled-related sequence protein 1
8
8 9.5 cM
20377
Mm.281691
2210415K03Rik
RIKEN cDNA 2210415K03 gene
8
72362
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTTTCCCTGC
(
4
)
47.3
0.0473
P8 Cb GC
TGCGCTCTGA
(
2
)
3.3
0.0033
P8 Cb GC
AAAACAAAAC
(
12
)
1.6
0.0016
P8 Cb GC
ATTGCCTATA
(
2
)
1.6
0.0016
P8 Cb GC
ATTTTTTTTT (
36
)
1.6
0.0016
P8 GC+1d culture
CTTTCCCTGC
(
4
)
21.7
0.0217
P8 GC+1d culture
AAGAGAATGA
(
5
)
4.6
0.0046
P8 GC+1d culture
ATTTTTTTTT (
36
)
1.1
0.0011
P8 GC+1d culture
CCATCCTGGA
(
4
)
1.1
0.0011
P8 GC+1d culture
CGTGGTCCCC
(
2
)
1.1
0.0011
P8 GC+1d culture
GGCCCCCAAG (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CTTTCCCTGC
(
4
)
37.5
0.0375
P8 GC+SHH+1d culture
ATTTTTTTTT (
36
)
3.5
0.0035
P8 GC+SHH+1d culture
TGCGCTCTGA
(
2
)
1.2
0.0012
3T3 fibroblasts
CTTTCCCTGC
(
4
)
49.1
0.0491
3T3 fibroblasts
ATTGCCTATA
(
2
)
3.5
0.0035
3T3 fibroblasts
GCTGTGCCTG
(
7
)
3.5
0.0035
3T3 fibroblasts
GGCCCCCAAG (
4
)
3.5
0.0035
E15 cortex
CTTTCCCTGC
(
4
)
19.8
0.0198
E15 cortex
ATTGCCTATA
(
2
)
4.9
0.0049
E15 cortex
TGCTGTGGAG
(
6
)
4.9
0.0049
P1 cortex
ATTGCCTATA
(
2
)
4.5
0.0045
P1 cortex
ATTTTTTTTT (
36
)
4.5
0.0045
P1 cortex
GGCCCCCAAG (
4
)
4.5
0.0045
Hypothalamus
TGCTGTGGAG
(
6
)
3.6
0.0036
E12.5 retina
CTTTCCCTGC
(
4
)
11.3
0.0113
E12.5 retina
GCTGTGCCTG
(
7
)
1.9
0.0019
E14.5 retina
CTTTCCCTGC
(
4
)
5.5
0.0055
E14.5 retina
TGGCAGGGCC
(
3
)
3.6
0.0036
E14.5 retina
ATTTTTTTTT (
36
)
1.8
0.0018
E14.5 retina
CCATCCTGGA
(
4
)
1.8
0.0018
E14.5 retina
GCTGTGCCTG
(
7
)
1.8
0.0018
E16.5 retina
AAAACAAAAG (
14
)
3.6
0.0036
E16.5 retina
CTTTCCCTGC
(
4
)
3.6
0.0036
E16.5 retina
GCTGTGCCTG
(
7
)
1.8
0.0018
E16.5 retina
GGCCCCCAAG (
4
)
1.8
0.0018
E16.5 retina
TGGCAGGGCC
(
3
)
1.8
0.0018
E18.5 retina
ATTTTTTTTT (
36
)
1.8
0.0018
E18.5 retina
CTTTCCCTGC
(
4
)
1.8
0.0018
P0.5 retina
ATTTTTTTTT (
36
)
3.9
0.0039
P0.5 retina
CGTGGTCCCC
(
2
)
3.9
0.0039
P0.5 retina
CTTTCCCTGC
(
4
)
3.9
0.0039
P0.5 retina
AAAACAAAAC
(
12
)
2
0.002
P0.5 retina
CCATCCTGGA
(
4
)
2
0.002
P2.5 retina
ATTTTTTTTT (
36
)
3.5
0.0035
P2.5 retina
CTTTCCCTGC
(
4
)
1.8
0.0018
P2.5 retina
GGCCCCCAAG (
4
)
1.8
0.0018
P2.5 retina
TGCTGTGGAG
(
6
)
1.8
0.0018
P4.5 retina
ATTTTTTTTT (
36
)
4
0.004
P4.5 retina
CTTTCCCTGC
(
4
)
2
0.002
P4.5 retina
GGCCCCCAAG (
4
)
2
0.002
P4.5 retina
TGGCAGGGCC
(
3
)
2
0.002
P6.5 retina
CTTTCCCTGC
(
4
)
3.3
0.0033
P6.5 retina
AAAACAAAAC
(
12
)
1.7
0.0017
P10.5 crx- retina
AAAACAAAAC
(
12
)
1.9
0.0019
P10.5 crx- retina
AAAACAAAAG (
14
)
1.9
0.0019
P10.5 crx- retina
CTTTCCCTGC
(
4
)
1.9
0.0019
P10.5 crx- retina
TGCTGTGGAG
(
6
)
1.9
0.0019
P10.5 crx+ retina
CTTTCCCTGC
(
4
)
1.9
0.0019
P10.5 crx+ retina
TGGCAGGGCC
(
3
)
1.9
0.0019
Adult retinal
CCATCCTGGA
(
4
)
1.9
0.0019
ONL
AAAACAAAAG (
14
)
1.9
0.0019
ONL
CCATCCTGGA
(
4
)
1.9
0.0019
ONL
TGCTGTGGAG
(
6
)
1.9
0.0019
