Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.188105
2010111I01Rik
RIKEN cDNA 2010111I01 gene
13
72061
Mm.188105
2300006M17Rik
RIKEN cDNA 2300006M17 gene
13
69466
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 21 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 29 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
ATGAATTGTT (
2
)
2.3
0.0023
P8 GC+1d culture
ATGAATTGTT (
2
)
GCACAGAGGG
(
3
)
GCCGTCCGTT
4.5
0.0045
P8 GC+SHH+1d culture
ATGAATTGTT (
2
)
GCCGTCCGTT
2.4
0.0024
3T3 fibroblasts
AGCCCAGCCA
(
2
)
GCCGTCCGTT
10.5
0.0105
E15 cortex
GCCGTCCGTT
4.9
0.0049
P1 cortex
TGACACCTCC
(
3
)
4.5
0.0045
Hypothalamus
GTGGTACATA
(
2
)
1.8
0.0018
E12.5 retina
ATGAATTGTT (
2
)
1.9
0.0019
E16.5 retina
ATGAATTGTT (
2
)
GTGGTACATA
(
2
)
7.2
0.0072
P2.5 retina
ATGAATTGTT (
2
)
GTGGTACATA
(
2
)
TGACACCTCC
(
3
)
8.9
0.0089
P4.5 retina
GCACAGAGGG
(
3
)
TGACACCTCC
(
3
)
4
0.004
P6.5 retina
GCACAGAGGG
(
3
)
1.7
0.0017
P10.5 crx- retina
AGCCCAGCCA
(
2
)
ATGAATTGTT (
2
)
5.6
0.0056
P10.5 crx+ retina
ACCTTGGCTG
AGCCCAGCCA
(
2
)
5.7
0.0057
Adult retinal
ACCTTGGCTG
ATGAATTGTT (
2
)
29.7
0.0297
ONL
ACCTTGGCTG
AGCCCAGCCA
(
2
)
TGACACCTCC
(
3
)
24.9
0.0249
