Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.240627 Sox4SRY-box containing gene 4 13  13 A3-A5 (13 20.0 cM)  20677 
 Gene Ontology DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
 Human Homolog SOX4[SRY (sex determining region Y)-box 4]
 Clusters 
   Neighbors    

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge



SAGE Tags

Total 128 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCACAGGCACGA
ATTTTTTTTC (2)
CCATAGGACT
GGGACCTCGT
TCCCTGGGCA
32.70.0327
Cb medulloblastomaACAGGCACGA
ATTTTTTTTC (2)
11.50.0115
P8 GC+1d cultureACAGGCACGA
ATTTTTTTTC (2)
CCAATGCTCC
CCATAGGACT
GGGACCTCGT
TCCCTGGGCA
TTATCCTGTC (2)
TTTACACTTC
26.10.0261
P8 GC+SHH+1d cultureACAGGCACGA
ATTTTTTTTC (2)
CCAATGCTCC
CCATAGGACT
GGGACCTCGT
TCCATTTCCG (2)
TCCCTGGGCA
TTATCCTGTC (2)
TTTACACTTC
29.20.0292
3T3 fibroblastsACAGGCACGA
CCAATGCTCC
GGGACCTCGT
GTCATAGCTG (2)
TCCCTGGGCA
TTATCCTGTC (2)
700.07
E15 cortexACAGGCACGA
ATTTTTTTTC (2)
CCAATGCTCC
GAGAAACTCC (2)
GGGACCTCGT
GTCATAGCTG (2)
TCCCTGGGCA
TTTACACTTC
242.30.2423
P1 cortexACAGGCACGA
ATTTTTTTTC (2)
CCATAGGACT
GGGACCTCGT
TCCCTGGGCA
TTATCCTGTC (2)
109.10.1091
HypothalamusATTTTTTTTC (2)
1.80.0018
E12.5 retinaACAGGCACGA
ATTTTTTTTC (2)
CCAATGCTCC
GGGACCTCGT
GTGATAGCAT
TCCCTGGGCA
TTTACACTTC
28.30.0283
E14.5 retinaACAGGCACGA
ATTTTTTTTC (2)
CCAATGCTCC
GAGAAACTCC (2)
GGGACCTCGT
GTGATAGCAT
TCCATTTCCG (2)
TCCCTGGGCA
TTATCCTGTC (2)
32.60.0326
E16.5 retinaACAGGCACGA
ATTTTTTTTC (2)
CCAATGCTCC
CCATAGGACT
GGGACCTCGT
TCCCTGGGCA
TTATCCTGTC (2)
70.60.0706
E18.5 retinaACAGGCACGA
ATTTTTTTTC (2)
CCAATGCTCC
CCATAGGACT
GGGACCTCGT
GTCAAGAAAG
GTGATAGCAT
TCCCTGGGCA
TTATCCTGTC (2)
TTTACACTTC
52.60.0526
P0.5 retinaACAGGCACGA
ATTTTTTTTC (2)
CCATAGGACT
GGGACCTCGT
GTCATAGCTG (2)
GTGATAGCAT
TCCCTGGGCA
TTATCCTGTC (2)
TTTACACTTC
68.80.0688
P2.5 retinaACAGGCACGA
ATTTTTTTTC (2)
CCATAGGACT
GGGACCTCGT
GTCATAGCTG (2)
GTGATAGCAT
TCCCTGGGCA
TTTACACTTC
63.40.0634
P4.5 retinaACAGGCACGA
ATTTTTTTTC (2)
CCAATGCTCC
CCATAGGACT
GAGAAACTCC (2)
GGGACCTCGT
GTCAAGAAAG
GTCATAGCTG (2)
GTGATAGCAT
TCCCTGGGCA
63.50.0635
P6.5 retinaACAGGCACGA
ATTTTTTTTC (2)
CCAATGCTCC
CCATAGGACT
GGGACCTCGT
GTCATAGCTG (2)
GTGATAGCAT
TCCATTTCCG (2)
TCCCTGGGCA
TTATCCTGTC (2)
TTTACACTTC
56.60.0566
P10.5 crx- retinaACAGGCACGA
GGGACCTCGT
14.80.0148
P10.5 crx+ retinaACAGGCACGA
ATTTTTTTTC (2)
CCAATGCTCC
GGGACCTCGT
GTGATAGCAT
15.20.0152
Adult retinalATTTTTTTTC (2)
GTCATAGCTG (2)
3.80.0038
ONLATTTTTTTTC (2)
GGGACCTCGT
GTCATAGCTG (2)
9.50.0095