Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.287892	Clpp	caseinolytic protease, ATP-dependent, proteolytic subunit homolog (E. coli)	17	17 D (17 34.0 cM)	53895
Gene Ontology	endopeptidase Clp activity | hydrolase activity | misfolded or incompletely synthesized protein catabolism | mitochondrion | peptidase activity | proteolysis and peptidolysis | serine-type endopeptidase activity
Human Homolog	CLPP[ClpP caseinolytic protease, ATP-dependent, proteolytic subunit homolog (E. coli)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTGAAAA (3) GAGGCCCAAG (3) GCGGGGAGAA (2) GGCTCCCTGC 8.1 0.0081 Cb medulloblastoma GAGGCCCAAG (3) GGCTCCCTGC 32.4 0.0324 P8 GC+1d culture GAGGCCCAAG (3) GGCCCCGATT GGCTCCCTGC TAGCTGACAG 22.8 0.0228 P8 GC+SHH+1d culture GAGGCCCAAG (3) GGCTCCCTGC TAGCGGTCCC (2) 12.9 0.0129 3T3 fibroblasts GAGGCCCAAG (3) 7 0.007 E15 cortex GAGGCCCAAG (3) GCGGGGAGAA (2) GGCCCCGATT GGCTCCCTGC 29.5 0.0295 P1 cortex GGCTCCCTGC 13.6 0.0136 Hypothalamus GAGGCCCAAG (3) GGCTCCCTGC 7.2 0.0072 E12.5 retina GAGGCCCAAG (3) 1.9 0.0019 E14.5 retina AAGCTGAAAA (3) GAGGCCCAAG (3) GGCTCCCTGC TAGCGGTCCC (2) TAGCTGACAG 12.6 0.0126 E16.5 retina GGCCCCGATT 1.8 0.0018 E18.5 retina CAGCCTTGTG GGCTCCCTGC 5.4 0.0054 P0.5 retina GAGGCCCAAG (3) GGCTCCCTGC 7.9 0.0079 P2.5 retina GAGGCCCAAG (3) GGCTCCCTGC 12.4 0.0124 P4.5 retina GAGGCCCAAG (3) GGCTCCCTGC 33.7 0.0337 P6.5 retina CAGCCTTGTG GAGGCCCAAG (3) GGCTCCCTGC 26.7 0.0267 P10.5 crx- retina CAGCCTTGTG GAGGCCCAAG (3) GAGGCCCCAA (2) GGCCCCGATT GGCTCCCTGC 20.5 0.0205 P10.5 crx+ retina AAGCTGAAAA (3) GAGGCCCAAG (3) GAGGCCCCAA (2) GCGGGGAGAA (2) GGCTCCCTGC 38.3 0.0383 Adult retinal GAGGCCCAAG (3) GGCTCCCTGC TAGCGGTCCC (2) TAGCTGACAG 18.6 0.0186 ONL AAGCTGAAAA (3) GAGGCCCAAG (3) GGCTCCCTGC 9.5 0.0095