Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291370	Rds	retinal degeneration, slow (retinitis pigmentosa 7)	17	17 C (17 18.84 cM)	19133
Gene Ontology	cell adhesion | G-protein coupled photoreceptor activity | integral to membrane | protein binding | vision
Human Homolog	RDS[retinal degeneration, slow]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 11 In Situ Hybridization Images

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SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCCTCTGCC GTGCTAGGAG (2) 6.5 0.0065 Cb medulloblastoma GACAAAGGGG (2) 18.5 0.0185 P8 GC+1d culture AGACATACCT GACAAAGGGG (2) 5.7 0.0057 P8 GC+SHH+1d culture GCCGCTGCTC (2) 1.2 0.0012 E15 cortex GCCGCTGCTC (2) 4.9 0.0049 P1 cortex GACAAAGGGG (2) GCCGCTGCTC (2) 13.6 0.0136 Hypothalamus AGACATACCT GACAAAGGGG (2) 7.2 0.0072 E12.5 retina AGACATACCT 1.9 0.0019 E14.5 retina AGACATACCT GACAAAGGGG (2) 5.4 0.0054 E16.5 retina AGACATACCT GTGCTAGGAG (2) 3.6 0.0036 P0.5 retina AGACATACCT GGCGTCGTCA 4 0.004 P2.5 retina GGCGTCGTCA GTGCTAGGAG (2) 10.5 0.0105 P4.5 retina AGACATACCT GACAAAGGGG (2) GGCGTCGTCA GTGCTAGGAG (2) TCTGCTCTAA 12 0.012 P6.5 retina AGACATACCT GACAAAGGGG (2) GCCGCTGCTC (2) GGCGTCGTCA GTGCTAGGAG (2) TCCCAGCATC TCTGCTCTAA 36.7 0.0367 P10.5 crx- retina AGACATACCT GCGCTGCTCA (2) GGCGTCGTCA GTGCTAGGAG (2) TCTGCTCTAA 16.8 0.0168 P10.5 crx+ retina AGACATACCT GACAAAGGGG (2) GCGCTGCTCA (2) GGCGTCGTCA GTGCTAGGAG (2) TTACACAATG 44.1 0.0441 Adult retinal AGACATACCT ATCCTCTGCC CTCCAGATTG (2) GACAAAGGGG (2) GCGCTGCTCA (2) GGCGTCGTCA GTGCTAGGAG (2) TCCCAGCATC TCTGCTCTAA TTACACAATG 237 0.237 ONL AGACATACCT ATCCTCTGCC GACAAAGGGG (2) GGCGTCGTCA GTGCTAGGAG (2) TCCCAGCATC TTACACAATG 109.1 0.1091