Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.94371
Dtna
dystrobrevin alpha
18
18 A2 (18 18.0 cM)
13527
Mm.94371
2210407P21Rik
RIKEN cDNA 2210407P21 gene
18
68022
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 4 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AATTTTTAAA
(
3
)
ACTTCCTGTT
(
3
)
CAGATTAAAA (
2
)
CAGTTGTGTG
TTGTCTCTTT
(
2
)
14.7
0.0147
Cb medulloblastoma
AATTTTTAAA
(
3
)
CAGTTGTGTG
6.9
0.0069
P8 GC+1d culture
CAGATTAAAA (
2
)
CAGTTGTGTG
TTAAACCAAT
(
2
)
TTATATTTTG
(
5
)
12.5
0.0125
P8 GC+SHH+1d culture
AATTTTTAAA
(
3
)
CAGTTGTGTG
TTATATTTTG
(
5
)
8.2
0.0082
E15 cortex
CAGTTGTGTG
4.9
0.0049
Hypothalamus
ACTTCCTGTT
(
3
)
CAGATTAAAA (
2
)
CAGTTGTGTG
TTAAACCAAT
(
2
)
9
0.009
E12.5 retina
AGCAAGCTTC (
3
)
1.9
0.0019
E14.5 retina
AATTTTTAAA
(
3
)
CAGATTAAAA (
2
)
CAGTTGTGTG
7.2
0.0072
E16.5 retina
CAGTTGTGTG
1.8
0.0018
E18.5 retina
TTGTCTCTTT
(
2
)
3.6
0.0036
P0.5 retina
AGCAAGCTTC (
3
)
CCATCCTCCC
4
0.004
P2.5 retina
CAGTTGTGTG
1.8
0.0018
P4.5 retina
CAGTTGTGTG
TTAAACCAAT
(
2
)
7.9
0.0079
P10.5 crx- retina
ACTTCCTGTT
(
3
)
CAGTTGTGTG
5.6
0.0056
P10.5 crx+ retina
CAGTTGTGTG
CCATCCTCCC
3.8
0.0038
Adult retinal
AATTTTTAAA
(
3
)
CAGTTGTGTG
TTATATTTTG
(
5
)
5.7
0.0057
ONL
AATTTTTAAA
(
3
)
AGCAAGCTTC (
3
)
CAGTTGTGTG
CCATCCTCCC
9.5
0.0095
