Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.117094	Zswim4	zinc finger, SWIM domain containing 4	8		212168
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	ZSWIM4[zinc finger, SWIM domain containing 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAAACCAG (7) 57.1 0.0571 P8 Cb GC GGATGCTGGG (5) 31 0.031 Cb medulloblastoma AAGAAACCAG (7) 30.1 0.0301 Cb medulloblastoma GGATGCTGGG (5) 18.5 0.0185 P8 GC+1d culture AAGAAACCAG (7) 49.1 0.0491 P8 GC+1d culture GGATGCTGGG (5) 29.7 0.0297 P8 GC+1d culture TCTGCATCTC (7) 2.3 0.0023 P8 GC+SHH+1d culture AAGAAACCAG (7) 51.5 0.0515 P8 GC+SHH+1d culture GGATGCTGGG (5) 35.1 0.0351 P8 GC+SHH+1d culture GGGAAACTAA (2) 1.2 0.0012 3T3 fibroblasts GGATGCTGGG (5) 17.5 0.0175 3T3 fibroblasts AAGAAACCAG (7) 7 0.007 E15 cortex GGATGCTGGG (5) 74.2 0.0742 E15 cortex AAGAAACCAG (7) 9.9 0.0099 E15 cortex GGGAAACTAA (2) 9.9 0.0099 P1 cortex AAGAAACCAG (7) 22.7 0.0227 P1 cortex GGGAAACTAA (2) 13.6 0.0136 P1 cortex GGATGCTGGG (5) 9.1 0.0091 Hypothalamus AAGAAACCAG (7) 21.7 0.0217 Hypothalamus GGATGCTGGG (5) 7.2 0.0072 Hypothalamus GGGAAACTAA (2) 1.8 0.0018 E12.5 retina AAGAAACCAG (7) 54.4 0.0544 E12.5 retina GGATGCTGGG (5) 45.1 0.0451 E12.5 retina GGGAAACTAA (2) 11.3 0.0113 E12.5 retina TCTGCATCTC (7) 1.9 0.0019 E14.5 retina AAGAAACCAG (7) 54.7 0.0547 E14.5 retina GGATGCTGGG (5) 18.2 0.0182 E14.5 retina GGGAAACTAA (2) 3.6 0.0036 E14.5 retina TCTGCATCTC (7) 3.6 0.0036 E16.5 retina AAGAAACCAG (7) 54.3 0.0543 E16.5 retina GGATGCTGGG (5) 18.1 0.0181 E16.5 retina TCTGCATCTC (7) 1.8 0.0018 E18.5 retina GGATGCTGGG (5) 40 0.04 E18.5 retina GGGAAACTAA (2) 18.2 0.0182 E18.5 retina AAGAAACCAG (7) 14.6 0.0146 P0.5 retina AAGAAACCAG (7) 27.5 0.0275 P0.5 retina GGATGCTGGG (5) 23.6 0.0236 P0.5 retina GGGAAACTAA (2) 11.8 0.0118 P2.5 retina GGATGCTGGG (5) 42.2 0.0422 P2.5 retina AAGAAACCAG (7) 17.6 0.0176 P2.5 retina GGGAAACTAA (2) 5.3 0.0053 P2.5 retina TCTGCATCTC (7) 1.8 0.0018 P4.5 retina AAGAAACCAG (7) 25.8 0.0258 P4.5 retina GGATGCTGGG (5) 25.8 0.0258 P4.5 retina GGGAAACTAA (2) 5.9 0.0059 P4.5 retina TCTGCATCTC (7) 2 0.002 P6.5 retina AAGAAACCAG (7) 8.3 0.0083 P6.5 retina GGATGCTGGG (5) 6.7 0.0067 P6.5 retina GGGAAACTAA (2) 3.3 0.0033 P6.5 retina TCTGCATCTC (7) 1.7 0.0017 P10.5 crx- retina GGATGCTGGG (5) 26 0.026 P10.5 crx- retina AAGAAACCAG (7) 16.7 0.0167 P10.5 crx+ retina GGATGCTGGG (5) 26.9 0.0269 P10.5 crx+ retina AAGAAACCAG (7) 9.6 0.0096 Adult retinal GGATGCTGGG (5) 24.1 0.0241 Adult retinal AAGAAACCAG (7) 3.7 0.0037 ONL GGATGCTGGG (5) 3.8 0.0038