Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.129415	4733401N06Rik	RIKEN cDNA 4733401N06 gene	6		70822
Mm.129415	A930037G23Rik	RIKEN cDNA A930037G23 gene	6		320678
Human Homolog	HOM-TES-103[HOM-TES-103 tumor antigen-like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 128 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTCCAAGG (14) 78.3 0.0783 P8 Cb GC GGGCTCACCA (5) 4.9 0.0049 P8 Cb GC AGGTCCACCA (7) 3.3 0.0033 P8 Cb GC CACAAAAAAA (9) 3.3 0.0033 P8 Cb GC CACTGAGCTC (4) 1.6 0.0016 P8 Cb GC CCCTCCAAGG (5) 1.6 0.0016 P8 Cb GC GCCTTCAAGG (3) 1.6 0.0016 Cb medulloblastoma GCCTCCAAGG (14) 120.2 0.1202 Cb medulloblastoma CACAAAAAAA (9) 9.2 0.0092 Cb medulloblastoma CACTGAGCTC (4) 4.6 0.0046 Cb medulloblastoma AGGTCCACCA (7) 2.3 0.0023 Cb medulloblastoma GCCTTCAAGG (3) 2.3 0.0023 Cb medulloblastoma GGGCTCACCA (5) 2.3 0.0023 Cb medulloblastoma TCCTCCAAGG (5) 2.3 0.0023 P8 GC+1d culture GCCTCCAAGG (14) 99.3 0.0993 P8 GC+1d culture CACAAAAAAA (9) 4.6 0.0046 P8 GC+1d culture CCCTGGCTCC (4) 3.4 0.0034 P8 GC+1d culture AGGTCCACCA (7) 2.3 0.0023 P8 GC+1d culture GGGCTCACCA (5) 2.3 0.0023 P8 GC+1d culture GCATCCAAGG (4) 1.1 0.0011 P8 GC+1d culture GCTTCCAAGG (7) 1.1 0.0011 P8 GC+1d culture TCCTCCAAGG (5) 1.1 0.0011 P8 GC+SHH+1d culture GCCTCCAAGG (14) 146.4 0.1464 P8 GC+SHH+1d culture CACAAAAAAA (9) 7 0.007 P8 GC+SHH+1d culture CCCAAAAAAA (19) 3.5 0.0035 P8 GC+SHH+1d culture CACTGAGCTC (4) 2.3 0.0023 P8 GC+SHH+1d culture CCACCCACTC (5) 2.3 0.0023 P8 GC+SHH+1d culture AGGTCCACCA (7) 1.2 0.0012 3T3 fibroblasts GCCTCCAAGG (14) 452.1 0.4521 3T3 fibroblasts GCTCCAAGGA (8) 10.5 0.0105 3T3 fibroblasts GGGCTCACCA (5) 7 0.007 3T3 fibroblasts CACAAAAAAA (9) 3.5 0.0035 3T3 fibroblasts TCCTCCAAGG (5) 3.5 0.0035 E15 cortex GCCTCCAAGG (14) 133.6 0.1336 E15 cortex CCCAAAAAAA (19) 4.9 0.0049 P1 cortex GCCTCCAAGG (14) 122.7 0.1227 P1 cortex GCCTTCAAGG (3) 4.5 0.0045 P1 cortex GCTCCAAGGA (8) 4.5 0.0045 P1 cortex GGGCTCACCA (5) 4.5 0.0045 Hypothalamus GCCTCCAAGG (14) 74.3 0.0743 Hypothalamus CACAAAAAAA (9) 9.1 0.0091 Hypothalamus AGGTCCACCA (7) 5.4 0.0054 Hypothalamus CCAGTGAGCT (6) 5.4 0.0054 Hypothalamus CACTGAGCTC (4) 1.8 0.0018 E12.5 retina GCCTCCAAGG (14) 236.5 0.2365 E12.5 retina GCATCCAAGG (4) 9.4 0.0094 E12.5 retina GGGCTCACCA (5) 5.6 0.0056 E12.5 retina CACTGAGCTC (4) 3.8 0.0038 E12.5 retina CACAAAAAAA (9) 1.9 0.0019 E12.5 retina CCACCCACTC (5) 1.9 0.0019 E12.5 retina CCAGTGAGCT (6) 1.9 0.0019 E14.5 retina GCCTCCAAGG (14) 40.1 0.0401 E14.5 retina AGGTCCACCA (7) 3.6 0.0036 E14.5 retina CACAAAAAAA (9) 1.8 0.0018 E14.5 retina CCACCCACTC (5) 1.8 0.0018 E14.5 retina GGGCTCACCA (5) 1.8 0.0018 E16.5 retina GCCTCCAAGG (14) 83.3 0.0833 E16.5 retina AGGTCCACCA (7) 5.4 0.0054 E16.5 retina CACAAAAAAA (9) 1.8 0.0018 E16.5 retina CACTGAGCTC (4) 1.8 0.0018 E16.5 retina CCACCCACTC (5) 1.8 0.0018 E16.5 retina CCAGTGAGCT (6) 1.8 0.0018 E16.5 retina CCCAAAAAAA (19) 1.8 0.0018 E18.5 retina GCCTCCAAGG (14) 105.5 0.1055 E18.5 retina AGGTCCACCA (7) 7.3 0.0073 E18.5 retina CACAAAAAAA (9) 3.6 0.0036 E18.5 retina CCCAAAAAAA (19) 3.6 0.0036 E18.5 retina GGGCTCACCA (5) 1.8 0.0018 E18.5 retina TATCTTTATT (4) 1.8 0.0018 P0.5 retina GCCTCCAAGG (14) 239.4 0.2394 P0.5 retina CACAAAAAAA (9) 5.9 0.0059 P0.5 retina GGGCTCACCA (5) 5.9 0.0059 P0.5 retina CCACCCACTC (5) 2 0.002 P0.5 retina CCAGTGAGCT (6) 2 0.002 P0.5 retina CCCAAAAAAA (19) 2 0.002 P0.5 retina TCCTCCAAGG (5) 2 0.002 P2.5 retina GCCTCCAAGG (14) 176 0.176 P2.5 retina CACAAAAAAA (9) 7 0.007 P2.5 retina CACTGAGCTC (4) 5.3 0.0053 P2.5 retina CCCAAAAAAA (19) 1.8 0.0018 P2.5 retina GGGCTCACCA (5) 1.8 0.0018 P2.5 retina TCCTCCAAGG (5) 1.8 0.0018 P4.5 retina GCCTCCAAGG (14) 91.1 0.0911 P4.5 retina CACAAAAAAA (9) 9.9 0.0099 P4.5 retina GGGCTCACCA (5) 4 0.004 P4.5 retina CACTGAGCTC (4) 2 0.002 P4.5 retina CCCAAAAAAA (19) 2 0.002 P4.5 retina CCCTGGCTCC (4) 2 0.002 P6.5 retina GCCTCCAAGG (14) 153.4 0.1534 P6.5 retina CACAAAAAAA (9) 6.7 0.0067 P6.5 retina AGGTCCACCA (7) 5 0.005 P6.5 retina CCCAAAAAAA (19) 3.3 0.0033 P6.5 retina GCCTTCAAGG (3) 3.3 0.0033 P6.5 retina GGGCTCACCA (5) 3.3 0.0033 P6.5 retina CACTGAGCTC (4) 1.7 0.0017 P6.5 retina TCCTCCAAGG (5) 1.7 0.0017 P10.5 crx- retina GCCTCCAAGG (14) 341.8 0.3418 P10.5 crx- retina CACAAAAAAA (9) 13 0.013 P10.5 crx- retina AGGTCCACCA (7) 7.4 0.0074 P10.5 crx- retina GGGCTCACCA (5) 5.6 0.0056 P10.5 crx- retina TATCTTTATT (4) 3.7 0.0037 P10.5 crx- retina GCTTCCAAGG (7) 1.9 0.0019 P10.5 crx+ retina GCCTCCAAGG (14) 265.3 0.2653 P10.5 crx+ retina AGGTCCACCA (7) 3.8 0.0038 P10.5 crx+ retina CACAAAAAAA (9) 3.8 0.0038 P10.5 crx+ retina CCACCCACTC (5) 3.8 0.0038 P10.5 crx+ retina CACTGAGCTC (4) 1.9 0.0019 P10.5 crx+ retina CCCTCCAAGG (5) 1.9 0.0019 P10.5 crx+ retina TCCTCCAAGG (5) 1.9 0.0019 Adult retinal GCCTCCAAGG (14) 327.7 0.3277 Adult retinal AGGTCCACCA (7) 5.6 0.0056 Adult retinal CACAAAAAAA (9) 3.7 0.0037 Adult retinal CCAGTGAGCT (6) 3.7 0.0037 Adult retinal CACTGAGCTC (4) 1.9 0.0019 Adult retinal CCCAAAAAAA (19) 1.9 0.0019 Adult retinal CCCTCCAAGG (5) 1.9 0.0019 Adult retinal GCATCCAAGG (4) 1.9 0.0019 Adult retinal GCCTTCAAGG (3) 1.9 0.0019 Adult retinal GCTTCCAAGG (7) 1.9 0.0019 Adult retinal GGGCTCACCA (5) 1.9 0.0019 Adult retinal TCCTCCAAGG (5) 1.9 0.0019 ONL GCCTCCAAGG (14) 352.4 0.3524 ONL GCATCCAAGG (4) 7.7 0.0077 ONL AGGTCCACCA (7) 1.9 0.0019 ONL CACAAAAAAA (9) 1.9 0.0019 ONL CCCAAAAAAA (19) 1.9 0.0019 ONL GCTTCCAAGG (7) 1.9 0.0019 ONL GGGCTCACCA (5) 1.9 0.0019