Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.148721	Atp5f1	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1	3	3 57.0 cM	11950
Gene Ontology	ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | mitochondrion | mitochondrion | proton transport | proton-transporting two-sector ATPase complex
Human Homolog	ATP5F1[ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTGAAGAG (2) 17.9 0.0179 P8 Cb GC TGCAGAGGAA (5) 4.9 0.0049 P8 Cb GC CACTGGTTCA (2) 3.3 0.0033 P8 Cb GC AAAATGATCA (3) 1.6 0.0016 P8 Cb GC CTCGACTGCT 1.6 0.0016 Cb medulloblastoma TGGTGAAGAG (2) 20.8 0.0208 Cb medulloblastoma TGCAGAGGAA (5) 16.2 0.0162 Cb medulloblastoma CACTGGTTCA (2) 2.3 0.0023 Cb medulloblastoma TTCTGTACAG (3) 2.3 0.0023 P8 GC+1d culture TGGTGAAGAG (2) 24 0.024 P8 GC+1d culture TGCAGAGGAA (5) 4.6 0.0046 P8 GC+1d culture TTCTGTAAAG (5) 2.3 0.0023 P8 GC+SHH+1d culture TGGTGAAGAG (2) 11.7 0.0117 P8 GC+SHH+1d culture CTCGACTGCT 2.3 0.0023 P8 GC+SHH+1d culture TGCAGAGGAA (5) 1.2 0.0012 3T3 fibroblasts TGGTGAAGAG (2) 21 0.021 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex TGGTGAAGAG (2) 14.8 0.0148 E15 cortex GAGAAGGCAC (5) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex TGGTGAAGAG (2) 4.5 0.0045 Hypothalamus TGGTGAAGAG (2) 14.5 0.0145 Hypothalamus TGCAGAGGAA (5) 5.4 0.0054 Hypothalamus CACTGGTTCA (2) 1.8 0.0018 Hypothalamus TTCTGTACAG (3) 1.8 0.0018 E12.5 retina TGGTGAAGAG (2) 7.5 0.0075 E12.5 retina AGCCAGAGAG 1.9 0.0019 E12.5 retina TGCAGAGGAA (5) 1.9 0.0019 E14.5 retina TGGTGAAGAG (2) 7.3 0.0073 E14.5 retina TTCTGTACAG (3) 1.8 0.0018 E16.5 retina TGGTGAAGAG (2) 18.1 0.0181 E16.5 retina TGTTCTTCCT (7) 3.6 0.0036 E16.5 retina CTCGACTGCT 1.8 0.0018 E16.5 retina GAGAAGGCAC (5) 1.8 0.0018 E16.5 retina TGCAGAGGAA (5) 1.8 0.0018 E18.5 retina CACTGGTTCA (2) 1.8 0.0018 E18.5 retina CTCGACTGCT 1.8 0.0018 E18.5 retina TGCAGAGGAA (5) 1.8 0.0018 E18.5 retina TTCTGTACAG (3) 1.8 0.0018 P0.5 retina TGGTGAAGAG (2) 23.6 0.0236 P0.5 retina TGCAGAGGAA (5) 5.9 0.0059 P0.5 retina CTCGACTGCT 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TTCTGTAAAG (5) 2 0.002 P2.5 retina TGGTGAAGAG (2) 10.6 0.0106 P2.5 retina CTCGACTGCT 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TGCAGAGGAA (5) 1.8 0.0018 P2.5 retina TTCTGTACAG (3) 1.8 0.0018 P4.5 retina TGCAGAGGAA (5) 5.9 0.0059 P4.5 retina TGGTGAAGAG (2) 5.9 0.0059 P4.5 retina CACTGGTTCA (2) 2 0.002 P4.5 retina GAGAAGGCAC (5) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina TGGTGAAGAG (2) 16.7 0.0167 P6.5 retina TGCAGAGGAA (5) 5 0.005 P6.5 retina AAAATGATCA (3) 3.3 0.0033 P6.5 retina CACTGGTTCA (2) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina CTCGACTGCT 1.7 0.0017 P6.5 retina TTCTGTAAAG (5) 1.7 0.0017 P10.5 crx- retina TGGTGAAGAG (2) 48.3 0.0483 P10.5 crx- retina TGCAGAGGAA (5) 1.9 0.0019 P10.5 crx- retina TGTTCTTCCT (7) 1.9 0.0019 P10.5 crx- retina TTCTGTAAAG (5) 1.9 0.0019 P10.5 crx+ retina TGGTGAAGAG (2) 11.5 0.0115 P10.5 crx+ retina TGCAGAGGAA (5) 7.7 0.0077 P10.5 crx+ retina AGCCAGAGAG 3.8 0.0038 P10.5 crx+ retina CTCGACTGCT 1.9 0.0019 Adult retinal TGGTGAAGAG (2) 29.6 0.0296 Adult retinal TGCAGAGGAA (5) 5.6 0.0056 Adult retinal CTCGACTGCT 1.9 0.0019 Adult retinal GAGAAGGCAC (5) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TGGTGAAGAG (2) 5.7 0.0057 ONL TGCAGAGGAA (5) 1.9 0.0019