Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1654	6230425C22Rik	RIKEN cDNA 6230425C22 gene	11		217109
Human Homolog	CGI-48[CGI-48 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTTTTTTC (20) 3.3 0.0033 P8 Cb GC TGCCACCACT (9) 3.3 0.0033 P8 Cb GC GATTTTTCTC (5) 1.6 0.0016 P8 Cb GC TCGAACAATC (3) 1.6 0.0016 Cb medulloblastoma ATTTTTTTTC (20) 9.2 0.0092 Cb medulloblastoma TGCCACCACT (9) 4.6 0.0046 P8 GC+1d culture ATTTTTTTTC (20) 3.4 0.0034 P8 GC+1d culture GATTTTTCTC (5) 2.3 0.0023 P8 GC+1d culture TGCCACCACT (9) 2.3 0.0023 P8 GC+SHH+1d culture ATTTTTTTTC (20) 4.7 0.0047 P8 GC+SHH+1d culture TGCCACCACT (9) 4.7 0.0047 P8 GC+SHH+1d culture GATTTTTCTC (5) 1.2 0.0012 3T3 fibroblasts TGCCACCACT (9) 14 0.014 E15 cortex ATTTTTTTTC (20) 4.9 0.0049 E15 cortex GATTTTTCTC (5) 4.9 0.0049 E15 cortex TCGAACAATC (3) 4.9 0.0049 E15 cortex TGCCACCACT (9) 4.9 0.0049 P1 cortex ATTTTTTTTC (20) 40.9 0.0409 P1 cortex TGCCACCACT (9) 4.5 0.0045 Hypothalamus TGCCACCACT (9) 7.2 0.0072 Hypothalamus ATTTTTTTTC (20) 1.8 0.0018 Hypothalamus GATTTTTCTC (5) 1.8 0.0018 E12.5 retina ATTTTTTTTC (20) 9.4 0.0094 E12.5 retina TGCCACCACT (9) 3.8 0.0038 E14.5 retina TGCCACCACT (9) 9.1 0.0091 E14.5 retina ATTTTTTTTC (20) 5.5 0.0055 E16.5 retina ATTTTTTTTC (20) 9.1 0.0091 E16.5 retina TGCCACCACT (9) 5.4 0.0054 E16.5 retina GGGGAGGGAG (4) 1.8 0.0018 E18.5 retina ATTTTTTTTC (20) 7.3 0.0073 E18.5 retina GATTTTTCTC (5) 1.8 0.0018 E18.5 retina GGGGAGGGAG (4) 1.8 0.0018 E18.5 retina TGCCACCACT (9) 1.8 0.0018 P0.5 retina TGCCACCACT (9) 5.9 0.0059 P0.5 retina ATTTTTTTTC (20) 3.9 0.0039 P2.5 retina ATTTTTTTTC (20) 8.8 0.0088 P2.5 retina TGCCACCACT (9) 3.5 0.0035 P2.5 retina GATTTTTCTC (5) 1.8 0.0018 P4.5 retina TGCCACCACT (9) 5.9 0.0059 P4.5 retina ATTTTTTTTC (20) 2 0.002 P4.5 retina TCGAACAATC (3) 2 0.002 P6.5 retina ATTTTTTTTC (20) 6.7 0.0067 P6.5 retina TGCCACCACT (9) 1.7 0.0017 P10.5 crx- retina GGGGAGGGAG (4) 1.9 0.0019 P10.5 crx+ retina ATTTTTTTTC (20) 3.8 0.0038 P10.5 crx+ retina GATTTTTCTC (5) 1.9 0.0019 P10.5 crx+ retina TGCCACCACT (9) 1.9 0.0019 Adult retinal ATTTTTTTTC (20) 1.9 0.0019 Adult retinal TGCCACCACT (9) 1.9 0.0019 ONL TGCCACCACT (9) 3.8 0.0038 ONL ATTTTTTTTC (20) 1.9 0.0019