Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.172720
AA959742
expressed sequence AA959742
11
11 D
98238
Mm.172720
AI596487
expressed sequence AI596487
11
103797
Mm.172720
C78668
expressed sequence C78668
11
97711
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 5 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGAGTGGT
(
4
)
11.4
0.0114
P8 Cb GC
TCTGAGTGGT
(
3
)
9.8
0.0098
P8 Cb GC
TAGGCCACAC
(
3
)
1.6
0.0016
P8 Cb GC
TCTGAGTGGA
(
3
)
1.6
0.0016
Cb medulloblastoma
TCTGAGTGGT
(
3
)
9.2
0.0092
Cb medulloblastoma
TGTGAGTGGT
(
4
)
4.6
0.0046
P8 GC+1d culture
TGTGAGTGGT
(
4
)
13.7
0.0137
P8 GC+1d culture
TCTGAGTGGT
(
3
)
10.3
0.0103
P8 GC+1d culture
ATGTCACCAT
(
3
)
1.1
0.0011
P8 GC+1d culture
TCTGAGTGGA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TCTGAGTGGT
(
3
)
18.7
0.0187
P8 GC+SHH+1d culture
TGTGAGTGGT
(
4
)
11.7
0.0117
P8 GC+SHH+1d culture
ATGTCACCAT
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TAGGCCACAC
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTAAAGGAG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TCTGAGTGGA
(
3
)
1.2
0.0012
3T3 fibroblasts
TGTGAGTGGT
(
4
)
10.5
0.0105
3T3 fibroblasts
TCTGAGTGGT
(
3
)
7
0.007
3T3 fibroblasts
CCTAAAGGAG
(
3
)
3.5
0.0035
3T3 fibroblasts
GTGGCGCTGC
(
4
)
3.5
0.0035
E15 cortex
TAGGCCACAC
(
3
)
4.9
0.0049
P1 cortex
AAGGGATCAG
(
3
)
4.5
0.0045
P1 cortex
CCTAAAGGAG
(
3
)
4.5
0.0045
P1 cortex
TGTGAGTGGT
(
4
)
4.5
0.0045
Hypothalamus
TCTGAGTGGT
(
3
)
5.4
0.0054
Hypothalamus
TGTGAGTGGT
(
4
)
3.6
0.0036
Hypothalamus
AAAACAGGAG
(
3
)
1.8
0.0018
Hypothalamus
AAGGGATCAG
(
3
)
1.8
0.0018
Hypothalamus
GTGGCGCTGC
(
4
)
1.8
0.0018
E12.5 retina
TCTGAGTGGT
(
3
)
20.7
0.0207
E12.5 retina
TGTGAGTGGT
(
4
)
5.6
0.0056
E12.5 retina
AAAACAGGAG
(
3
)
1.9
0.0019
E14.5 retina
TCTGAGTGGT
(
3
)
16.4
0.0164
E14.5 retina
ATGTCACCAT
(
3
)
7.3
0.0073
E14.5 retina
TCTGAGTGGA
(
3
)
1.8
0.0018
E14.5 retina
TGTGAGTGGT
(
4
)
1.8
0.0018
E16.5 retina
TCTGAGTGGT
(
3
)
7.2
0.0072
E16.5 retina
TGTGAGTGGT
(
4
)
3.6
0.0036
E16.5 retina
AAGGGATCAG
(
3
)
1.8
0.0018
E16.5 retina
CCTAAAGGAG
(
3
)
1.8
0.0018
E16.5 retina
TCTGAGTGGA
(
3
)
1.8
0.0018
E18.5 retina
TCTGAGTGGT
(
3
)
25.5
0.0255
E18.5 retina
ATGTCACCAT
(
3
)
5.5
0.0055
E18.5 retina
TAGGCCACAC
(
3
)
3.6
0.0036
E18.5 retina
TCTGAGTGGA
(
3
)
3.6
0.0036
P0.5 retina
TCTGAGTGGT
(
3
)
9.8
0.0098
P0.5 retina
TGTGAGTGGT
(
4
)
7.9
0.0079
P0.5 retina
ATGTCACCAT
(
3
)
3.9
0.0039
P0.5 retina
TCTGAGTGGA
(
3
)
3.9
0.0039
P2.5 retina
TCTGAGTGGT
(
3
)
17.6
0.0176
P2.5 retina
TCTGAGTGGA
(
3
)
1.8
0.0018
P4.5 retina
TCTGAGTGGT
(
3
)
27.7
0.0277
P4.5 retina
TCTGAGTGGA
(
3
)
2
0.002
P6.5 retina
TCTGAGTGGT
(
3
)
23.3
0.0233
P6.5 retina
TCTGAGTGGA
(
3
)
3.3
0.0033
P6.5 retina
GTGGCGCTGC
(
4
)
1.7
0.0017
P6.5 retina
TGTGAGTGGT
(
4
)
1.7
0.0017
P10.5 crx- retina
TCTGAGTGGT
(
3
)
7.4
0.0074
P10.5 crx- retina
TGTGAGTGGT
(
4
)
3.7
0.0037
P10.5 crx+ retina
TCTGAGTGGT
(
3
)
15.4
0.0154
P10.5 crx+ retina
TCTGAGTGGA
(
3
)
3.8
0.0038
P10.5 crx+ retina
TGTGAGTGGT
(
4
)
1.9
0.0019
Adult retinal
TCTGAGTGGT
(
3
)
5.6
0.0056
Adult retinal
TGTGAGTGGT
(
4
)
5.6
0.0056
Adult retinal
AAAACAGGAG
(
3
)
1.9
0.0019
ONL
AAAACAGGAG
(
3
)
1.9
0.0019
ONL
TCTGAGTGGA
(
3
)
1.9
0.0019
ONL
TCTGAGTGGT
(
3
)
1.9
0.0019
ONL
TGTGAGTGGT
(
4
)
1.9
0.0019
