Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.205569
Ppp2r5a
protein phosphatase 2, regulatory subunit B (B56), alpha isoform
1
1 H6
226849
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 8 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGTCATTTG (
2
)
50.6
0.0506
P8 Cb GC
GAGATGAACG
(
4
)
1.6
0.0016
P8 Cb GC
GCTGCTGGGG
(
6
)
1.6
0.0016
Cb medulloblastoma
CTGTCATTTG (
2
)
13.9
0.0139
Cb medulloblastoma
TGTTTTCACC
(
4
)
6.9
0.0069
Cb medulloblastoma
CACAGTATTC
(
3
)
2.3
0.0023
P8 GC+1d culture
CTGTCATTTG (
2
)
20.5
0.0205
P8 GC+1d culture
ATTAGACAGA (
6
)
1.1
0.0011
P8 GC+1d culture
GAGATGGACG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
CTGTCATTTG (
2
)
53.9
0.0539
P8 GC+SHH+1d culture
GAGATGGACG (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
CACAGTATTC
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CAGTCAGAAA
(
2
)
1.2
0.0012
3T3 fibroblasts
CTGTCATTTG (
2
)
14
0.014
3T3 fibroblasts
CAGTTGTATG
(
4
)
10.5
0.0105
E15 cortex
CTGTCATTTG (
2
)
19.8
0.0198
P1 cortex
TGTTTTCACC
(
4
)
4.5
0.0045
Hypothalamus
CTGTCATTTG (
2
)
1.8
0.0018
Hypothalamus
GAGATGAACG
(
4
)
1.8
0.0018
E12.5 retina
CTGTCATTTG (
2
)
50.7
0.0507
E12.5 retina
CACAGTATTC
(
3
)
7.5
0.0075
E12.5 retina
CAGTCAGAAA
(
2
)
3.8
0.0038
E12.5 retina
GAGATGGACG (
7
)
3.8
0.0038
E12.5 retina
GCTGCTGGGG
(
6
)
1.9
0.0019
E14.5 retina
CTGTCATTTG (
2
)
60.1
0.0601
E14.5 retina
ATTAGACAGA (
6
)
1.8
0.0018
E16.5 retina
CTGTCATTTG (
2
)
59.8
0.0598
E16.5 retina
GAGATGGACG (
7
)
3.6
0.0036
E16.5 retina
CAGTCAGAAA
(
2
)
1.8
0.0018
E18.5 retina
CTGTCATTTG (
2
)
67.3
0.0673
P0.5 retina
CTGTCATTTG (
2
)
64.8
0.0648
P0.5 retina
GCTGCTGGGG
(
6
)
3.9
0.0039
P0.5 retina
ATTAGACAGA (
6
)
2
0.002
P0.5 retina
CAGTCAGAAA
(
2
)
2
0.002
P2.5 retina
CTGTCATTTG (
2
)
47.5
0.0475
P2.5 retina
CAGTCAGAAA
(
2
)
1.8
0.0018
P2.5 retina
GCTGCTGGGG
(
6
)
1.8
0.0018
P2.5 retina
TGTTTTCACC
(
4
)
1.8
0.0018
P4.5 retina
CTGTCATTTG (
2
)
39.6
0.0396
P4.5 retina
GAGATGGACG (
7
)
4
0.004
P4.5 retina
CAGTCAGAAA
(
2
)
2
0.002
P6.5 retina
CTGTCATTTG (
2
)
43.4
0.0434
P6.5 retina
ATTAGACAGA (
6
)
1.7
0.0017
P6.5 retina
GCTGCTGGGG
(
6
)
1.7
0.0017
P10.5 crx- retina
CTGTCATTTG (
2
)
33.4
0.0334
P10.5 crx- retina
GAGATGAACG
(
4
)
1.9
0.0019
P10.5 crx+ retina
CTGTCATTTG (
2
)
21.1
0.0211
P10.5 crx+ retina
ATTAGACAGA (
6
)
3.8
0.0038
P10.5 crx+ retina
CACAGTATTC
(
3
)
1.9
0.0019
P10.5 crx+ retina
GAGATGGACG (
7
)
1.9
0.0019
Adult retinal
CTGTCATTTG (
2
)
22.2
0.0222
Adult retinal
GCTGCTGGGG
(
6
)
11.1
0.0111
Adult retinal
ATTAGACAGA (
6
)
1.9
0.0019
Adult retinal
TGTTTTCACC
(
4
)
1.9
0.0019
ONL
CTGTCATTTG (
2
)
11.5
0.0115
ONL
CACAGTATTC
(
3
)
3.8
0.0038
ONL
ATTAGACAGA (
6
)
1.9
0.0019
ONL
CAGTCAGAAA
(
2
)
1.9
0.0019
ONL
GCTGCTGGGG
(
6
)
1.9
0.0019
