Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.210334	Mbtd1	mbt domain containing 1	11	11 D	103537
Human Homolog	MBTD1[mbt domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

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SAGE Tags

Total 143 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC CTGCTGGTGG (15) 13.1 0.0131 P8 Cb GC GATGTGAAAA 6.5 0.0065 P8 Cb GC CGATTCCATA 1.6 0.0016 P8 Cb GC GCTACCTGTG (2) 1.6 0.0016 P8 Cb GC GTACCAGGGC 1.6 0.0016 P8 Cb GC TTCAAGAAGT (5) 1.6 0.0016 P8 Cb GC TTTGCTCTCT (2) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma CTGCTGGTGG (15) 11.6 0.0116 Cb medulloblastoma GATGTGAAAA 2.3 0.0023 Cb medulloblastoma GTACCAGGGC 2.3 0.0023 Cb medulloblastoma TTCAAGAAGT (5) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture CTGCTGGTGG (15) 16 0.016 P8 GC+1d culture GATGTGAAAA 5.7 0.0057 P8 GC+1d culture GTACCAGGGC 3.4 0.0034 P8 GC+1d culture ATGACTCACA (3) 1.1 0.0011 P8 GC+1d culture CGATTCCATA 1.1 0.0011 P8 GC+1d culture GGCAGGCGGG 1.1 0.0011 P8 GC+1d culture TTTGCTCTCT (2) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture CTGCTGGTGG (15) 10.5 0.0105 P8 GC+SHH+1d culture GATGTGAAAA 4.7 0.0047 P8 GC+SHH+1d culture TTCAAGAAGT (5) 3.5 0.0035 P8 GC+SHH+1d culture TTTGCTCTCT (2) 2.3 0.0023 P8 GC+SHH+1d culture CGATTCCATA 1.2 0.0012 P8 GC+SHH+1d culture GCTACCTGTG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGATGAGCC 1.2 0.0012 P8 GC+SHH+1d culture GTGGTGCACT 1.2 0.0012 P8 GC+SHH+1d culture TGTGTCCAGA (4) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts CTGCTGGTGG (15) 59.6 0.0596 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts ATGACTCACA (3) 3.5 0.0035 3T3 fibroblasts GATGTGAAAA 3.5 0.0035 3T3 fibroblasts GTACCAGGGC 3.5 0.0035 3T3 fibroblasts TTCTTTTATT (8) 3.5 0.0035 3T3 fibroblasts TTTGCTCTCT (2) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex CTGCTGGTGG (15) 9.9 0.0099 E15 cortex TTTGCTCTCT (2) 9.9 0.0099 E15 cortex GATGTGAAAA 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex AGAAAGCTTC (2) 4.5 0.0045 P1 cortex CTGCTGGTGG (15) 4.5 0.0045 P1 cortex GATGTGAAAA 4.5 0.0045 P1 cortex GTGATGAGCC 4.5 0.0045 P1 cortex GTGGTGCACT 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus CTGCTGGTGG (15) 7.2 0.0072 Hypothalamus GATGTGAAAA 1.8 0.0018 Hypothalamus TTCTTTTATT (8) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GATGTGAAAA 15 0.015 E12.5 retina AGAAAGCTTC (2) 3.8 0.0038 E12.5 retina ATGACTCACA (3) 3.8 0.0038 E12.5 retina TTTGCTCTCT (2) 3.8 0.0038 E12.5 retina GGCAGGTGGG (6) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GATGTGAAAA 5.5 0.0055 E14.5 retina ATGACTCACA (3) 3.6 0.0036 E14.5 retina AGAAAGCTTC (2) 1.8 0.0018 E14.5 retina CTGCTGGTGG (15) 1.8 0.0018 E14.5 retina GGCAGGCGGG 1.8 0.0018 E14.5 retina GTACCAGGGC 1.8 0.0018 E14.5 retina GTGGTGCACT 1.8 0.0018 E14.5 retina TACATACACA (3) 1.8 0.0018 E14.5 retina TTTGCTCTCT (2) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GATGTGAAAA 3.6 0.0036 E16.5 retina GGCAGGTGGG (6) 3.6 0.0036 E16.5 retina TTTGCTCTCT (2) 3.6 0.0036 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GATGTGAAAA 9.1 0.0091 E18.5 retina CTGCTGGTGG (15) 3.6 0.0036 E18.5 retina TTCTTTTATT (8) 3.6 0.0036 E18.5 retina GCTACCTGTG (2) 1.8 0.0018 E18.5 retina GGCAGGCGGG 1.8 0.0018 E18.5 retina GGCAGGTGGG (6) 1.8 0.0018 E18.5 retina GTGGTGCACT 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina CTGCTGGTGG (15) 9.8 0.0098 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TTTGCTCTCT (2) 3.9 0.0039 P0.5 retina GATGTGAAAA 2 0.002 P0.5 retina GCTACCTGTG (2) 2 0.002 P0.5 retina GTACCAGGGC 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GATGTGAAAA 17.6 0.0176 P2.5 retina TTCAAGAAGT (5) 14.1 0.0141 P2.5 retina CTGCTGGTGG (15) 5.3 0.0053 P2.5 retina GGCAGGTGGG (6) 3.5 0.0035 P2.5 retina TTTGCTCTCT (2) 3.5 0.0035 P2.5 retina AGAAAGCTTC (2) 1.8 0.0018 P2.5 retina ATGACTCACA (3) 1.8 0.0018 P2.5 retina GGCAGGCGGG 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TACATACACA (3) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GATGTGAAAA 7.9 0.0079 P4.5 retina TTCAAGAAGT (5) 4 0.004 P4.5 retina AGAAAGCTTC (2) 2 0.002 P4.5 retina CTGCTGGTGG (15) 2 0.002 P4.5 retina GCTACCTGTG (2) 2 0.002 P4.5 retina GTACCAGGGC 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina CTGCTGGTGG (15) 6.7 0.0067 P6.5 retina GATGTGAAAA 6.7 0.0067 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TACATACACA (3) 1.7 0.0017 P6.5 retina TTCAAGAAGT (5) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina CTGCTGGTGG (15) 11.1 0.0111 P10.5 crx- retina GATGTGAAAA 5.6 0.0056 P10.5 crx- retina GGCAGGCGGG 1.9 0.0019 P10.5 crx- retina TGTGTCCAGA (4) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GATGTGAAAA 9.6 0.0096 P10.5 crx+ retina CTGCTGGTGG (15) 3.8 0.0038 P10.5 crx+ retina TTTGCTCTCT (2) 3.8 0.0038 P10.5 crx+ retina AGAAAGCTTC (2) 1.9 0.0019 P10.5 crx+ retina GGCAGGCGGG 1.9 0.0019 P10.5 crx+ retina GGCAGGTGGG (6) 1.9 0.0019 P10.5 crx+ retina GTGATGAGCC 1.9 0.0019 P10.5 crx+ retina TGTGTCCAGA (4) 1.9 0.0019 P10.5 crx+ retina TTCTTTTATT (8) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal CTGCTGGTGG (15) 20.4 0.0204 Adult retinal AGAAAGCTTC (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal GTGGTGCACT 1.9 0.0019 Adult retinal TACATACACA (3) 1.9 0.0019 Adult retinal TTTGCTCTCT (2) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL CTGCTGGTGG (15) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL ATGACTCACA (3) 1.9 0.0019 ONL GATGTGAAAA 1.9 0.0019 ONL TTCAAGAAGT (5) 1.9 0.0019 ONL TTTGCTCTCT (2) 1.9 0.0019