Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21841	Sfrs2	splicing factor, arginine/serine-rich 2 (SC-35)	11	11 73.0 cM	20382
Gene Ontology	DNA binding | mRNA splice site selection | nuclear mRNA splicing, via spliceosome | nucleus | protein binding | RNA binding | spliceosome complex | spliceosome complex
Human Homolog	SFRS2[splicing factor, arginine/serine-rich 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGTATCTTT (2) 40.8 0.0408 P8 Cb GC TACAGCCATT 8.2 0.0082 P8 Cb GC TTTTAAGTAC 4.9 0.0049 P8 Cb GC GAAGAGTCCT 3.3 0.0033 P8 Cb GC GACCGATGGA 3.3 0.0033 P8 Cb GC TGCACTTTGG (2) 1.6 0.0016 P8 Cb GC TTCGGATATA 1.6 0.0016 Cb medulloblastoma GTGTATCTTT (2) 13.9 0.0139 P8 GC+1d culture GTGTATCTTT (2) 29.7 0.0297 P8 GC+1d culture TACAGCCATT 2.3 0.0023 P8 GC+1d culture TTCGGATATA 1.1 0.0011 P8 GC+SHH+1d culture GTGTATCTTT (2) 34 0.034 P8 GC+SHH+1d culture TTTTAAGTAC 4.7 0.0047 P8 GC+SHH+1d culture GACCGATGGA 1.2 0.0012 P8 GC+SHH+1d culture GGGTATCTTT 1.2 0.0012 P8 GC+SHH+1d culture TACAGCCATT 1.2 0.0012 P8 GC+SHH+1d culture TGCACTTTGG (2) 1.2 0.0012 P8 GC+SHH+1d culture TTCGGATATA 1.2 0.0012 3T3 fibroblasts TGCACTTTGG (2) 17.5 0.0175 3T3 fibroblasts GTGTATCTTT (2) 10.5 0.0105 3T3 fibroblasts GAAGAGTCCT 7 0.007 3T3 fibroblasts TACAGCCATT 3.5 0.0035 E15 cortex GTGTATCTTT (2) 4.9 0.0049 P1 cortex GTGTATCTTT (2) 13.6 0.0136 P1 cortex TTCGGATATA 13.6 0.0136 Hypothalamus GTGTATCTTT (2) 7.2 0.0072 Hypothalamus TACAGCCATT 1.8 0.0018 Hypothalamus TGCACTTTGG (2) 1.8 0.0018 E12.5 retina GTGTATCTTT (2) 63.8 0.0638 E12.5 retina GAAGAGTCCT 3.8 0.0038 E12.5 retina GGGTATCTTT 3.8 0.0038 E12.5 retina TTCGGATATA 3.8 0.0038 E12.5 retina TGCACTTTGG (2) 1.9 0.0019 E12.5 retina TTTTAAGTAC 1.9 0.0019 E14.5 retina GTGTATCTTT (2) 38.3 0.0383 E14.5 retina TGCACTTTGG (2) 7.3 0.0073 E14.5 retina TTTTAAGTAC 7.3 0.0073 E14.5 retina TACAGCCATT 5.5 0.0055 E14.5 retina TTCGGATATA 5.5 0.0055 E14.5 retina GAAGAGTCCT 1.8 0.0018 E16.5 retina GTGTATCTTT (2) 43.5 0.0435 E16.5 retina TGCACTTTGG (2) 10.9 0.0109 E16.5 retina TACAGCCATT 5.4 0.0054 E16.5 retina GAAGAGTCCT 1.8 0.0018 E16.5 retina TTCGGATATA 1.8 0.0018 E16.5 retina TTTTAAGTAC 1.8 0.0018 E18.5 retina GTGTATCTTT (2) 61.8 0.0618 E18.5 retina TGCACTTTGG (2) 7.3 0.0073 E18.5 retina TTCGGATATA 7.3 0.0073 E18.5 retina GAAGAGTCCT 1.8 0.0018 E18.5 retina GACCGATGGA 1.8 0.0018 E18.5 retina TACAGCCATT 1.8 0.0018 E18.5 retina TTTTAAGTAC 1.8 0.0018 P0.5 retina GTGTATCTTT (2) 45.1 0.0451 P0.5 retina TACAGCCATT 7.9 0.0079 P0.5 retina TTCGGATATA 7.9 0.0079 P0.5 retina TGCACTTTGG (2) 5.9 0.0059 P2.5 retina GTGTATCTTT (2) 70.4 0.0704 P2.5 retina TGCACTTTGG (2) 8.8 0.0088 P2.5 retina GAAGAGTCCT 7 0.007 P2.5 retina TTCGGATATA 7 0.007 P2.5 retina TACAGCCATT 3.5 0.0035 P4.5 retina GTGTATCTTT (2) 37.6 0.0376 P4.5 retina TTCGGATATA 11.9 0.0119 P4.5 retina TACAGCCATT 2 0.002 P4.5 retina TGCACTTTGG (2) 2 0.002 P6.5 retina GTGTATCTTT (2) 50 0.05 P6.5 retina TTCGGATATA 13.3 0.0133 P10.5 crx- retina GTGTATCTTT (2) 14.9 0.0149 P10.5 crx- retina TTCGGATATA 3.7 0.0037 P10.5 crx- retina GAAGAGTCCT 1.9 0.0019 P10.5 crx- retina GACCGATGGA 1.9 0.0019 P10.5 crx- retina TACAGCCATT 1.9 0.0019 P10.5 crx+ retina GTGTATCTTT (2) 32.7 0.0327 P10.5 crx+ retina GTGTCTCTTT 1.9 0.0019 P10.5 crx+ retina TACAGCCATT 1.9 0.0019 P10.5 crx+ retina TTCGGATATA 1.9 0.0019 P10.5 crx+ retina TTTTAAGTAC 1.9 0.0019 Adult retinal GTGTATCTTT (2) 14.8 0.0148 Adult retinal TACAGCCATT 1.9 0.0019 Adult retinal TGCACTTTGG (2) 1.9 0.0019 Adult retinal TTCGGATATA 1.9 0.0019 ONL GTGTATCTTT (2) 15.3 0.0153 ONL GTGTCTCTTT 3.8 0.0038 ONL TACAGCCATT 1.9 0.0019