Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.233903	Nnat	neuronatin	2	2 H1 (2 88.0 cM)	18111
Gene Ontology	development
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGGGAGTGG (2) 21.2 0.0212 P8 Cb GC GGAGCCAGTG (2) 8.2 0.0082 P8 Cb GC TCAGCTGAAT (3) 8.2 0.0082 P8 Cb GC GGTGGGAATG (6) 4.9 0.0049 P8 Cb GC GCCGCAGTGG (3) 3.3 0.0033 P8 Cb GC GTGGGAGTGG (3) 1.6 0.0016 Cb medulloblastoma TCAGCTGAAT (3) 9.2 0.0092 Cb medulloblastoma GGGGGAGTGG (2) 2.3 0.0023 Cb medulloblastoma GGTGGGAATG (6) 2.3 0.0023 P8 GC+1d culture GGGGGAGTGG (2) 54.8 0.0548 P8 GC+1d culture TCAGCTGAAT (3) 13.7 0.0137 P8 GC+1d culture GGAGCCAGTG (2) 4.6 0.0046 P8 GC+1d culture AACCGTTTCT 3.4 0.0034 P8 GC+1d culture GTTCCGAAAG 1.1 0.0011 P8 GC+SHH+1d culture GGGGGAGTGG (2) 37.5 0.0375 P8 GC+SHH+1d culture TCAGCTGAAT (3) 16.4 0.0164 P8 GC+SHH+1d culture GGTGGGAATG (6) 3.5 0.0035 P8 GC+SHH+1d culture AACCGTTTCT 2.3 0.0023 P8 GC+SHH+1d culture GGAGCCAGTG (2) 2.3 0.0023 P8 GC+SHH+1d culture GGGGAGTGGA (3) 1.2 0.0012 P8 GC+SHH+1d culture GTCCAGCCAT (2) 1.2 0.0012 3T3 fibroblasts TCAGCTGAAT (3) 3.5 0.0035 E15 cortex GGGGGAGTGG (2) 326.6 0.3266 E15 cortex GCCGCAGTGG (3) 34.6 0.0346 E15 cortex GGGGAGTGGA (3) 9.9 0.0099 E15 cortex TCAGCTGAAT (3) 9.9 0.0099 E15 cortex GGAGCCAGTG (2) 4.9 0.0049 E15 cortex GGGGGGAGTG (2) 4.9 0.0049 E15 cortex GTGGGAGTGG (3) 4.9 0.0049 P1 cortex GGGGGAGTGG (2) 163.6 0.1636 P1 cortex GCCGCAGTGG (3) 27.3 0.0273 P1 cortex AACCGTTTCT 9.1 0.0091 P1 cortex TCAGCTGAAT (3) 9.1 0.0091 P1 cortex GGGGAGTGGA (3) 4.5 0.0045 Hypothalamus GGGGGAGTGG (2) 43.5 0.0435 Hypothalamus TCAGCTGAAT (3) 10.9 0.0109 Hypothalamus AACCGTTTCT 1.8 0.0018 Hypothalamus GCCGCAGTGG (3) 1.8 0.0018 Hypothalamus GGAGCCAGTG (2) 1.8 0.0018 Hypothalamus GGGGAGTGGA (3) 1.8 0.0018 E12.5 retina TCAGCTGAAT (3) 18.8 0.0188 E12.5 retina GGGGGAGTGG (2) 15 0.015 E12.5 retina GGAGCCAGTG (2) 5.6 0.0056 E12.5 retina AGGGAGCAAG (4) 3.8 0.0038 E12.5 retina AAGATCGAAC 1.9 0.0019 E12.5 retina GTTCCGAAAG 1.9 0.0019 E14.5 retina GGGGGAGTGG (2) 18.2 0.0182 E14.5 retina TCAGCTGAAT (3) 10.9 0.0109 E14.5 retina GGAGCCAGTG (2) 3.6 0.0036 E14.5 retina AAGATCGAAC 1.8 0.0018 E14.5 retina GAGGGAAGTT 1.8 0.0018 E14.5 retina GTGGGAGTGG (3) 1.8 0.0018 E16.5 retina GGGGGAGTGG (2) 23.5 0.0235 E16.5 retina GGAGCCAGTG (2) 7.2 0.0072 E16.5 retina TCAGCTGAAT (3) 1.8 0.0018 E18.5 retina GGGGGAGTGG (2) 29.1 0.0291 E18.5 retina GCCGCAGTGG (3) 7.3 0.0073 E18.5 retina TCAGCTGAAT (3) 7.3 0.0073 E18.5 retina AAGATCGAAC 3.6 0.0036 E18.5 retina GAGGGAAGTT 1.8 0.0018 E18.5 retina GGAGCCAGTG (2) 1.8 0.0018 P0.5 retina GGGGGAGTGG (2) 100.1 0.1001 P0.5 retina GGAGCCAGTG (2) 11.8 0.0118 P0.5 retina GCCGCAGTGG (3) 7.9 0.0079 P0.5 retina TCAGCTGAAT (3) 3.9 0.0039 P0.5 retina AAGATCGAAC 2 0.002 P0.5 retina GGGGAGTGGA (3) 2 0.002 P0.5 retina GGGGGGAGTG (2) 2 0.002 P0.5 retina GGTGGGAATG (6) 2 0.002 P2.5 retina GGGGGAGTGG (2) 40.5 0.0405 P2.5 retina TCAGCTGAAT (3) 12.3 0.0123 P2.5 retina GGAGCCAGTG (2) 7 0.007 P2.5 retina GCCGCAGTGG (3) 5.3 0.0053 P2.5 retina GGTGGGAATG (6) 5.3 0.0053 P2.5 retina AAGATCGAAC 1.8 0.0018 P2.5 retina AGGGAGCAAG (4) 1.8 0.0018 P2.5 retina GGGGGGAGTG (2) 1.8 0.0018 P2.5 retina GTCCAGCCAT (2) 1.8 0.0018 P4.5 retina GGGGGAGTGG (2) 41.6 0.0416 P4.5 retina TCAGCTGAAT (3) 21.8 0.0218 P4.5 retina GGTGGGAATG (6) 5.9 0.0059 P4.5 retina GGAGCCAGTG (2) 4 0.004 P4.5 retina AACCGTTTCT 2 0.002 P4.5 retina AAGATCGAAC 2 0.002 P4.5 retina GCCGCAGTGG (3) 2 0.002 P4.5 retina GTTCCGAAAG 2 0.002 P6.5 retina GGGGGAGTGG (2) 46.7 0.0467 P6.5 retina TCAGCTGAAT (3) 11.7 0.0117 P6.5 retina GGAGCCAGTG (2) 5 0.005 P6.5 retina GGGGAGTGGA (3) 5 0.005 P6.5 retina AACCGTTTCT 1.7 0.0017 P6.5 retina GAGGGAAGTT 1.7 0.0017 P6.5 retina GTCCAGCCAT (2) 1.7 0.0017 P10.5 crx- retina GGGGGAGTGG (2) 20.4 0.0204 P10.5 crx- retina TCAGCTGAAT (3) 18.6 0.0186 P10.5 crx- retina GCCGCAGTGG (3) 3.7 0.0037 P10.5 crx- retina AACCGTTTCT 1.9 0.0019 P10.5 crx+ retina GGGGGAGTGG (2) 15.4 0.0154 P10.5 crx+ retina TCAGCTGAAT (3) 15.4 0.0154 P10.5 crx+ retina GCCGCAGTGG (3) 1.9 0.0019 P10.5 crx+ retina GGAGCCAGTG (2) 1.9 0.0019 P10.5 crx+ retina GGGGGGAGTG (2) 1.9 0.0019 Adult retinal TCAGCTGAAT (3) 9.3 0.0093 Adult retinal GGGGGAGTGG (2) 1.9 0.0019 ONL TCAGCTGAAT (3) 7.7 0.0077 ONL GGAGCCAGTG (2) 1.9 0.0019