Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246412	1700020I14Rik	RIKEN cDNA 1700020I14 gene	2		66602
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 17 In Situ Hybridization Images

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SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCAGAGAAT 14.7 0.0147 P8 Cb GC AAGGCTCACA (2) 3.3 0.0033 P8 Cb GC CTTGGGAATA 3.3 0.0033 P8 Cb GC CTTTATTGCT 1.6 0.0016 P8 Cb GC GACTTGGGTC (2) 1.6 0.0016 P8 Cb GC TAAGCTGGCA 1.6 0.0016 Cb medulloblastoma AGCAGAGAAT 46.2 0.0462 Cb medulloblastoma AAGGCTCACA (2) 18.5 0.0185 Cb medulloblastoma GGTGGATCCC 6.9 0.0069 Cb medulloblastoma GTTTAGGATG 4.6 0.0046 Cb medulloblastoma TATCCCAGGC 4.6 0.0046 Cb medulloblastoma TAAGCTGGCA 2.3 0.0023 Cb medulloblastoma TGAGACTGGG 2.3 0.0023 P8 GC+1d culture AGCAGAGAAT 14.8 0.0148 P8 GC+1d culture AAGGCTCACA (2) 5.7 0.0057 P8 GC+1d culture AGGTAAAGGA (2) 1.1 0.0011 P8 GC+1d culture CTTGGGAATA 1.1 0.0011 P8 GC+1d culture GTTTAGGATG 1.1 0.0011 P8 GC+1d culture TATCCCAGGC 1.1 0.0011 P8 GC+1d culture TATTACATTA (2) 1.1 0.0011 P8 GC+1d culture TGAGACTGGG 1.1 0.0011 P8 GC+1d culture TGGCCACTTA 1.1 0.0011 P8 GC+SHH+1d culture AGCAGAGAAT 29.3 0.0293 P8 GC+SHH+1d culture AAGGCTCACA (2) 8.2 0.0082 P8 GC+SHH+1d culture CTTGGGAATA 3.5 0.0035 P8 GC+SHH+1d culture AATATTTATT (2) 1.2 0.0012 P8 GC+SHH+1d culture AGGTAAAGGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GACTTGGGTC (2) 1.2 0.0012 P8 GC+SHH+1d culture TATCCCAGGC 1.2 0.0012 P8 GC+SHH+1d culture TGAGACTGGG 1.2 0.0012 3T3 fibroblasts GACTTGGGTC (2) 7 0.007 3T3 fibroblasts AAGGCTCACA (2) 3.5 0.0035 E15 cortex AAGGCTCACA (2) 14.8 0.0148 E15 cortex GTAGCTGGCT 9.9 0.0099 E15 cortex AGCAGAGAAT 4.9 0.0049 E15 cortex AGGTAAAGGA (2) 4.9 0.0049 P1 cortex AGCAGAGAAT 27.3 0.0273 P1 cortex AGGTAAAGGA (2) 9.1 0.0091 P1 cortex AAGGCTCACA (2) 4.5 0.0045 P1 cortex TATTACATTA (2) 4.5 0.0045 Hypothalamus AAGGCTCACA (2) 16.3 0.0163 Hypothalamus AGCAGAGAAT 7.2 0.0072 Hypothalamus CTTTATTGCT 1.8 0.0018 Hypothalamus TGGCCACTTA 1.8 0.0018 E12.5 retina AGCAGAGAAT 18.8 0.0188 E12.5 retina AAGGCTCACA (2) 5.6 0.0056 E12.5 retina CTTGGGAATA 3.8 0.0038 E12.5 retina TATCCCAGGC 1.9 0.0019 E14.5 retina AAGGCTCACA (2) 21.9 0.0219 E14.5 retina AGCAGAGAAT 10.9 0.0109 E14.5 retina AATATTTATT (2) 3.6 0.0036 E14.5 retina CTTTATTGCT 1.8 0.0018 E14.5 retina GTAGCTGGCT 1.8 0.0018 E14.5 retina TATTACATTA (2) 1.8 0.0018 E14.5 retina TGAGACTGGG 1.8 0.0018 E16.5 retina AGCAGAGAAT 14.5 0.0145 E16.5 retina AAGGCTCACA (2) 10.9 0.0109 E16.5 retina AGGTAAAGGA (2) 1.8 0.0018 E16.5 retina GTTCACCTTT 1.8 0.0018 E16.5 retina TAAAAGCCTG (2) 1.8 0.0018 E16.5 retina TATTACATTA (2) 1.8 0.0018 E18.5 retina AGCAGAGAAT 38.2 0.0382 E18.5 retina AAGGCTCACA (2) 7.3 0.0073 E18.5 retina GTTCACCTTT 1.8 0.0018 E18.5 retina TATTACATTA (2) 1.8 0.0018 P0.5 retina AGCAGAGAAT 5.9 0.0059 P0.5 retina AGGTAAAGGA (2) 5.9 0.0059 P0.5 retina AAGGCTCACA (2) 2 0.002 P0.5 retina CTTGGGAATA 2 0.002 P0.5 retina TAAAAGCCTG (2) 2 0.002 P0.5 retina TATCCCAGGC 2 0.002 P0.5 retina TGGCCACTTA 2 0.002 P2.5 retina AGCAGAGAAT 28.2 0.0282 P2.5 retina AAGGCTCACA (2) 14.1 0.0141 P2.5 retina TATTACATTA (2) 3.5 0.0035 P2.5 retina CTTTATTGCT 1.8 0.0018 P2.5 retina GTTCACCTTT 1.8 0.0018 P4.5 retina AGCAGAGAAT 37.6 0.0376 P4.5 retina AAGGCTCACA (2) 4 0.004 P4.5 retina AGGTAAAGGA (2) 2 0.002 P4.5 retina TAAAAGCCTG (2) 2 0.002 P4.5 retina TAAGCTGGCA 2 0.002 P6.5 retina AGCAGAGAAT 26.7 0.0267 P6.5 retina AAGGCTCACA (2) 16.7 0.0167 P10.5 crx- retina AGCAGAGAAT 26 0.026 P10.5 crx- retina AAGGCTCACA (2) 14.9 0.0149 P10.5 crx- retina CTTTATTGCT 1.9 0.0019 P10.5 crx- retina TATTACATTA (2) 1.9 0.0019 P10.5 crx+ retina AGCAGAGAAT 46.1 0.0461 P10.5 crx+ retina AAGGCTCACA (2) 19.2 0.0192 P10.5 crx+ retina CTTGGGAATA 3.8 0.0038 P10.5 crx+ retina TATTACATTA (2) 1.9 0.0019 Adult retinal AGCAGAGAAT 31.5 0.0315 Adult retinal AAGGCTCACA (2) 13 0.013 Adult retinal CTTGGGAATA 1.9 0.0019 Adult retinal CTTTATTGCT 1.9 0.0019 Adult retinal GACTTGGGTC (2) 1.9 0.0019 Adult retinal TGAGACTGGG 1.9 0.0019 ONL AGCAGAGAAT 30.6 0.0306 ONL AAGGCTCACA (2) 17.2 0.0172 ONL AATATTTATT (2) 1.9 0.0019 ONL CTTGGGAATA 1.9 0.0019 ONL CTTTATTGCT 1.9 0.0019 ONL GACTTGGGTC (2) 1.9 0.0019 ONL TAAAAGCCTG (2) 1.9 0.0019 ONL TATTACATTA (2) 1.9 0.0019