Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.249142	Tcfe3	transcription factor E3	X	X 1.8 cM	209446
Gene Ontology	DNA binding | nucleus | regulation of osteoclast differentiation | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	TFE3[transcription factor binding to IGHM enhancer 3] | TFE3[transcription factor binding to IGHM enhancer 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCAGGCTCT (2) 1.6 0.0016 Cb medulloblastoma AGTTCAAGAC (2) 2.3 0.0023 Cb medulloblastoma CCCAGGCTCT (2) 2.3 0.0023 P8 GC+1d culture CCCAGGCTCT (2) 5.7 0.0057 P8 GC+SHH+1d culture CCCAGGCTCT (2) 3.5 0.0035 3T3 fibroblasts CCCAGGCTCT (2) 7 0.007 E15 cortex CCCAGGCTCT (2) 4.9 0.0049 Hypothalamus CCCAGGCTCT (2) 1.8 0.0018 Hypothalamus CCCTTTCATT (3) 1.8 0.0018 E12.5 retina AGTTCAAGAC (2) 3.8 0.0038 E12.5 retina CCCAGGCTCT (2) 1.9 0.0019 E14.5 retina CCCAGGCTCT (2) 1.8 0.0018 E16.5 retina CCCAGGCTCT (2) 5.4 0.0054 E18.5 retina AGTTCAAGAC (2) 1.8 0.0018 P0.5 retina CCCAGGCTCT (2) 2 0.002 P2.5 retina CCCAGGCTCT (2) 3.5 0.0035 P6.5 retina CCCAGGCTCT (2) 3.3 0.0033 P6.5 retina AGTTCAAGAC (2) 1.7 0.0017 P10.5 crx- retina CCCAGGCTCT (2) 9.3 0.0093 P10.5 crx- retina GCGCTGCTCA (2) 3.7 0.0037 P10.5 crx- retina CCCTTTCATT (3) 1.9 0.0019 P10.5 crx+ retina CCCAGGCTCT (2) 9.6 0.0096 P10.5 crx+ retina GCGCTGCTCA (2) 3.8 0.0038 P10.5 crx+ retina AGTTCAAGAC (2) 1.9 0.0019 Adult retinal CCCAGGCTCT (2) 13 0.013 Adult retinal GCGCTGCTCA (2) 3.7 0.0037 Adult retinal CCCTTTCATT (3) 1.9 0.0019 ONL AGTTCAAGAC (2) 5.7 0.0057