Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.25610
Ubap2l
ubiquitin associated protein 2-like
3
74383
Mm.25610
A430103N23Rik
RIKEN cDNA A430103N23 gene
3
109216
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 121 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTCCTCAAAT (
6
)
24.5
0.0245
P8 Cb GC
GCCTCAGTTC (
4
)
11.4
0.0114
P8 Cb GC
TGGGTGCTGG (
64
)
8.2
0.0082
P8 Cb GC
GTGAAAGGCA (
5
)
4.9
0.0049
P8 Cb GC
TAGTTCCAAC
(
2
)
3.3
0.0033
P8 Cb GC
ACTGGAATGG (
7
)
1.6
0.0016
P8 Cb GC
CACAGCTGCT (
5
)
1.6
0.0016
P8 Cb GC
GTGTGAATGT
(
2
)
1.6
0.0016
P8 Cb GC
TTTTACTGTC (
2
)
1.6
0.0016
Cb medulloblastoma
GCCTCAGTTC (
4
)
25.4
0.0254
Cb medulloblastoma
CTCCTCAAAT (
6
)
11.6
0.0116
Cb medulloblastoma
TGGGTGCTGG (
64
)
9.2
0.0092
Cb medulloblastoma
TAGTTCCAAC
(
2
)
4.6
0.0046
Cb medulloblastoma
GAGGAATCTG (
5
)
2.3
0.0023
P8 GC+1d culture
CTCCTCAAAT (
6
)
14.8
0.0148
P8 GC+1d culture
TAGTTCCAAC
(
2
)
5.7
0.0057
P8 GC+1d culture
TGGGTGCTGG (
64
)
5.7
0.0057
P8 GC+1d culture
CTTTTCCTTT (
7
)
4.6
0.0046
P8 GC+1d culture
TCTGTCCCAT
(
2
)
3.4
0.0034
P8 GC+1d culture
ACTGGAATGG (
7
)
2.3
0.0023
P8 GC+1d culture
CACAGCTGCT (
5
)
1.1
0.0011
P8 GC+1d culture
TTTTACTGTC (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CTCCTCAAAT (
6
)
26.9
0.0269
P8 GC+SHH+1d culture
TAGTTCCAAC
(
2
)
14.1
0.0141
P8 GC+SHH+1d culture
CTTTTCCTTT (
7
)
3.5
0.0035
P8 GC+SHH+1d culture
TGGGTGCTGG (
64
)
3.5
0.0035
P8 GC+SHH+1d culture
GATACAACAC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGAAAGGCA (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
ACTGGAATGG (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
CACAGCTGCT (
5
)
1.2
0.0012
3T3 fibroblasts
TGGGTGCTGG (
64
)
17.5
0.0175
3T3 fibroblasts
ACTGCAATGG
(
4
)
10.5
0.0105
3T3 fibroblasts
CTCCTCAAAT (
6
)
7
0.007
E15 cortex
CTCCTCAAAT (
6
)
24.7
0.0247
E15 cortex
TGGGTGCTGG (
64
)
14.8
0.0148
P1 cortex
TGGGTGCTGG (
64
)
13.6
0.0136
P1 cortex
ACTGGAATGG (
7
)
9.1
0.0091
P1 cortex
CTCCTCAAAT (
6
)
9.1
0.0091
P1 cortex
CTTTTCCTTT (
7
)
4.5
0.0045
P1 cortex
TCTGTCCCAT
(
2
)
4.5
0.0045
Hypothalamus
TGGGTGCTGG (
64
)
9.1
0.0091
Hypothalamus
CTCCTCAAAT (
6
)
3.6
0.0036
Hypothalamus
GCCTCAGTTC (
4
)
3.6
0.0036
Hypothalamus
CACAGCTGCT (
5
)
1.8
0.0018
Hypothalamus
CTTTTCCTTT (
7
)
1.8
0.0018
Hypothalamus
GAGGAATCTG (
5
)
1.8
0.0018
Hypothalamus
GCCTCAGCCT (
11
)
1.8
0.0018
Hypothalamus
GTGAAAGGCA (
5
)
1.8
0.0018
Hypothalamus
TAGTTCCAAC
(
2
)
1.8
0.0018
E12.5 retina
CTCCTCAAAT (
6
)
15
0.015
E12.5 retina
TGGGTGCTGG (
64
)
9.4
0.0094
E12.5 retina
TAGTTCCAAC
(
2
)
7.5
0.0075
E12.5 retina
GTGAAAGGCA (
5
)
5.6
0.0056
E12.5 retina
CACAGCTGCT (
5
)
1.9
0.0019
E12.5 retina
CTTTTCCTTT (
7
)
1.9
0.0019
E14.5 retina
TGGGTGCTGG (
64
)
54.7
0.0547
E14.5 retina
CTCCTCAAAT (
6
)
25.5
0.0255
E14.5 retina
TAGTTCCAAC
(
2
)
5.5
0.0055
E14.5 retina
GATACAACAC
(
2
)
1.8
0.0018
E14.5 retina
GTGAAAGGCA (
5
)
1.8
0.0018
E14.5 retina
GTGTGAATGT
(
2
)
1.8
0.0018
E16.5 retina
CTCCTCAAAT (
6
)
47.1
0.0471
E16.5 retina
TGGGTGCTGG (
64
)
41.7
0.0417
E16.5 retina
TAGTTCCAAC
(
2
)
7.2
0.0072
E16.5 retina
CACAGCTGCT (
5
)
1.8
0.0018
E16.5 retina
GCCTCAGCCT (
11
)
1.8
0.0018
E16.5 retina
GTGAAAGGCA (
5
)
1.8
0.0018
E18.5 retina
CTCCTCAAAT (
6
)
34.6
0.0346
E18.5 retina
TGGGTGCTGG (
64
)
20
0.02
E18.5 retina
TAGTTCCAAC
(
2
)
12.7
0.0127
E18.5 retina
CACAGCTGCT (
5
)
1.8
0.0018
E18.5 retina
CTTTTCCTTT (
7
)
1.8
0.0018
E18.5 retina
GCCTCAGTTC (
4
)
1.8
0.0018
P0.5 retina
CTCCTCAAAT (
6
)
21.6
0.0216
P0.5 retina
TGGGTGCTGG (
64
)
11.8
0.0118
P0.5 retina
TAGTTCCAAC
(
2
)
7.9
0.0079
P0.5 retina
CTTTTCCTTT (
7
)
5.9
0.0059
P2.5 retina
CTCCTCAAAT (
6
)
22.9
0.0229
P2.5 retina
TGGGTGCTGG (
64
)
17.6
0.0176
P2.5 retina
GTGAAAGGCA (
5
)
5.3
0.0053
P2.5 retina
CTTTTCCTTT (
7
)
3.5
0.0035
P2.5 retina
GAGGAATCTG (
5
)
1.8
0.0018
P2.5 retina
TAGTTCCAAC
(
2
)
1.8
0.0018
P4.5 retina
CTCCTCAAAT (
6
)
27.7
0.0277
P4.5 retina
TAGTTCCAAC
(
2
)
9.9
0.0099
P4.5 retina
TGGGTGCTGG (
64
)
9.9
0.0099
P4.5 retina
GAGGAATCTG (
5
)
2
0.002
P6.5 retina
CTCCTCAAAT (
6
)
23.3
0.0233
P6.5 retina
TGGGTGCTGG (
64
)
13.3
0.0133
P6.5 retina
GTGAAAGGCA (
5
)
5
0.005
P6.5 retina
ACTGGAATGG (
7
)
3.3
0.0033
P6.5 retina
TAGTTCCAAC
(
2
)
3.3
0.0033
P6.5 retina
GCCTCAGTTC (
4
)
1.7
0.0017
P10.5 crx- retina
TGGGTGCTGG (
64
)
20.4
0.0204
P10.5 crx- retina
CTCCTCAAAT (
6
)
9.3
0.0093
P10.5 crx- retina
TAGTTCCAAC
(
2
)
3.7
0.0037
P10.5 crx- retina
CTTTTCCTTT (
7
)
1.9
0.0019
P10.5 crx- retina
GCCTCAGCCT (
11
)
1.9
0.0019
P10.5 crx- retina
GTGAAAGGCA (
5
)
1.9
0.0019
P10.5 crx- retina
TTTTACTGTC (
2
)
1.9
0.0019
P10.5 crx+ retina
GCCTCAGTTC (
4
)
17.3
0.0173
P10.5 crx+ retina
TGGGTGCTGG (
64
)
15.4
0.0154
P10.5 crx+ retina
CTCCTCAAAT (
6
)
9.6
0.0096
P10.5 crx+ retina
GTGAAAGGCA (
5
)
3.8
0.0038
P10.5 crx+ retina
GAGGAATCTG (
5
)
1.9
0.0019
P10.5 crx+ retina
TAGTTCCAAC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TCTGTCCCAT
(
2
)
1.9
0.0019
Adult retinal
TGGGTGCTGG (
64
)
13
0.013
Adult retinal
CTCCTCAAAT (
6
)
7.4
0.0074
Adult retinal
GCCTCAGTTC (
4
)
3.7
0.0037
Adult retinal
GTGAAAGGCA (
5
)
3.7
0.0037
Adult retinal
ACTGGAATGG (
7
)
1.9
0.0019
Adult retinal
CTAATATTTG (
15
)
1.9
0.0019
Adult retinal
GTGTGAATGT
(
2
)
1.9
0.0019
Adult retinal
TAGTTCCAAC
(
2
)
1.9
0.0019
Adult retinal
TTTTACTGTC (
2
)
1.9
0.0019
ONL
TGGGTGCTGG (
64
)
40.2
0.0402
ONL
CTCCTCAAAT (
6
)
5.7
0.0057
ONL
CTTTTCCTTT (
7
)
1.9
0.0019
ONL
GTGAAAGGCA (
5
)
1.9
0.0019
ONL
GTGTGAATGT
(
2
)
1.9
0.0019
