Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.261037
1700003B17Rik
RIKEN cDNA 1700003B17 gene
1
69346
Mm.261037
4732493F09Rik
RIKEN cDNA 4732493F09 gene
1
1 E3
226407
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 5 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 20 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGGGCTGAA
(
3
)
3.3
0.0033
Cb medulloblastoma
AGGGGCCAGA
(
3
)
CAGTTAGTGA
(
2
)
13.9
0.0139
P8 GC+1d culture
AGGGGCCAGA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
AGGGGCCAGA
(
3
)
CAGTTAGTGA
(
2
)
3.5
0.0035
3T3 fibroblasts
AGGGGCCAGA
(
3
)
CAGTTAGTGA
(
2
)
10.5
0.0105
Hypothalamus
AGGGGCCAGA
(
3
)
9.1
0.0091
E12.5 retina
AGGGGCCAGA
(
3
)
CAGTTAGTGA
(
2
)
5.7
0.0057
P0.5 retina
AGGGGCCAGA
(
3
)
CAGTTAGTGA
(
2
)
4
0.004
P6.5 retina
AGGGGCCAGA
(
3
)
5
0.005
P10.5 crx- retina
AGGGGCCAGA
(
3
)
1.9
0.0019
P10.5 crx+ retina
AGGGGCCAGA
(
3
)
GAGGGCTGAA
(
3
)
3.8
0.0038
Adult retinal
AGGGGCCAGA
(
3
)
CAGTTAGTGA
(
2
)
11.1
0.0111
ONL
AGGGGCCAGA
(
3
)
3.8
0.0038
