Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28073
Trappc1
trafficking protein particle complex 1
11
11 B3 (11 37.0 cM)
245828
Human Homolog
TRAPPC1[trafficking protein particle complex 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 7 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 31 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
AATACTGACT
2.3
0.0023
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
AATACTGACT
1.2
0.0012
3T3 fibroblasts
AATACTGACT
3.5
0.0035
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
AAGGATGGCT
(
2
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
AATACTGACT
3.8
0.0038
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
AATACTGACT
3.6
0.0036
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
AAGGATGGCT
(
2
)
1.8
0.0018
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
AAGGATGGCT
(
2
)
1.8
0.0018
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
AATACTGACT
2
0.002
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
AATACTGACT
1.8
0.0018
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P10.5 crx- retina
AATACTGACT
1.9
0.0019
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
AATACTGACT
1.9
0.0019
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
ONL
AATACTGACT
1.9
0.0019