Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.291928
Catnb
catenin beta
9
9 F4 (9 72.0 cM)
12387
Gene Ontology
adherens junction
|
alpha-catenin binding
|
apical part of cell
|
basolateral plasma membrane
|
cadherin binding
|
cell adhesion
|
cell growth and/or maintenance
|
cell-cell adherens junction
|
cytoplasm
|
cytoskeleton
|
DNA binding
|
ectoderm development
|
gastrulation (sensu Mammalia)
|
heart development
|
hemopoiesis
|
intercellular junction
|
lamellipodium
|
lung development
|
membrane
|
membrane fraction
|
nucleus
|
patterning of blood vessels
|
protein binding
|
proximal/distal pattern formation
|
regulation of cell differentiation
|
regulation of cell proliferation
|
regulation of transcription
|
regulation of transcription, DNA-dependent
|
structural molecule activity
|
synapse organization and biogenesis
|
synaptic transmission
|
transcription
|
transcription coactivator activity
|
transcription factor activity
|
transcription factor complex
|
Wnt receptor signaling pathway
Human Homolog
CTNNB1[catenin (cadherin-associated protein), beta 1, 88kDa]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 13 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAATAGATCC
GATGGGCTGC
TTTTTGAACA
16.3
0.0163
Cb medulloblastoma
AAATAGATCC
TTTTTGAACA
13.9
0.0139
P8 GC+1d culture
TGTGGAAGTT
(
2
)
TTTTTGAACA
19.4
0.0194
P8 GC+SHH+1d culture
AAATAGATCC
TGTGGAAGTT
(
2
)
TTTTTGAACA
18.8
0.0188
3T3 fibroblasts
AAATAGATCC
TTTTTGAACA
7
0.007
E15 cortex
GATGGGCTGC
4.9
0.0049
P1 cortex
TTTTTGAACA
9.1
0.0091
Hypothalamus
AAATAGATCC
TGTGGAAGTT
(
2
)
TTTTTGAACA
16.3
0.0163
E12.5 retina
AAATAGATCC
TTTTTGAACA
41.3
0.0413
E14.5 retina
AAATAGATCC
TTTTTGAACA
23.7
0.0237
E16.5 retina
AAATAGATCC
GATGGGCTGC
TGTGGAAGTT
(
2
)
TTTTTGAACA
18.1
0.0181
E18.5 retina
AAATAGATCC
GATGGGCTGC
TTTTTGAACA
21.9
0.0219
P0.5 retina
AAATAGATCC
TGTGGAAGTT
(
2
)
TTTTTGAACA
31.5
0.0315
P2.5 retina
AAATAGATCC
TTTTTGAACA
28.2
0.0282
P4.5 retina
AAATAGATCC
TTTTTGAACA
11.9
0.0119
P6.5 retina
AAATAGATCC
TTTTTGAACA
15
0.015
P10.5 crx- retina
TTTTTGAACA
16.7
0.0167
P10.5 crx+ retina
AAATAGATCC
TGTGGAAGTT
(
2
)
TTTTTGAACA
21.1
0.0211
Adult retinal
TTTTTGAACA
5.6
0.0056
ONL
TGTGGAAGTT
(
2
)
TTTTTGAACA
7.6
0.0076