Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30210	Psma6	proteasome (prosome, macropain) subunit, alpha type 6	12		26443
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | peptidase activity | proteasome core complex (sensu Eukarya) | ubiquitin-dependent protein catabolism
Human Homolog	PSMA6[proteasome (prosome, macropain) subunit, alpha type, 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGTCTACT (5) 1.6 0.0016 Cb medulloblastoma CCTGTCTACT (5) 2.3 0.0023 P8 GC+1d culture CCTGTCTACT (5) 9.1 0.0091 P8 GC+1d culture CTGTGCAAAA (2) 1.1 0.0011 P8 GC+1d culture GCACTGACAG (5) 1.1 0.0011 P8 GC+1d culture TAATTGCAGT 1.1 0.0011 P8 GC+SHH+1d culture CCTGTCTACT (5) 11.7 0.0117 P8 GC+SHH+1d culture TGCCCATCCC (6) 1.2 0.0012 3T3 fibroblasts CCTGTCTACT (5) 21 0.021 E15 cortex CCTGTCTACT (5) 14.8 0.0148 E15 cortex TCCCGTGGTT 4.9 0.0049 P1 cortex CCTGTCTACT (5) 9.1 0.0091 P1 cortex GCACTGACAG (5) 4.5 0.0045 P1 cortex TCCCGTGGTT 4.5 0.0045 Hypothalamus CCTGTCTACT (5) 1.8 0.0018 E12.5 retina CCTGTCTACT (5) 7.5 0.0075 E12.5 retina GCACTGACAG (5) 1.9 0.0019 E14.5 retina CCTGTCTACT (5) 5.5 0.0055 E14.5 retina CTGTGCAAAA (2) 1.8 0.0018 E14.5 retina TGCCCATCCC (6) 1.8 0.0018 E16.5 retina CCTGTCTACT (5) 5.4 0.0054 E16.5 retina CTGTGCAAAA (2) 3.6 0.0036 E16.5 retina TAATTGCAGT 3.6 0.0036 E16.5 retina TGCCCATCCC (6) 3.6 0.0036 E16.5 retina TCCCGTGGTT 1.8 0.0018 E18.5 retina CCTGTCTACT (5) 1.8 0.0018 E18.5 retina GCACTGACAG (5) 1.8 0.0018 P0.5 retina CCTGTCTACT (5) 13.7 0.0137 P4.5 retina CCTGTCTACT (5) 4 0.004 P4.5 retina TAATTGCAGT 2 0.002 P6.5 retina CTGTGCAAAA (2) 1.7 0.0017 P6.5 retina TCCCGTGGTT 1.7 0.0017 P10.5 crx- retina CCTGTCTACT (5) 20.4 0.0204 P10.5 crx- retina TGCCCATCCC (6) 1.9 0.0019 P10.5 crx+ retina CCTGTCTACT (5) 5.8 0.0058 P10.5 crx+ retina GCACTGACAG (5) 1.9 0.0019 P10.5 crx+ retina GGGACAGGGG (2) 1.9 0.0019 Adult retinal CCTGTCTACT (5) 14.8 0.0148 Adult retinal GGGACAGGGG (2) 1.9 0.0019 ONL GGGACAGGGG (2) 11.5 0.0115 ONL CCTGTCTACT (5) 3.8 0.0038