Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34319	Ywhab	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	2	2 H3	54401
Gene Ontology	cellular_component unknown | protein binding | protein domain specific binding | protein targeting
Human Homolog	YWHAB[tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 14 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 160 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGTTTTTAT (5) 42.4 0.0424 P8 Cb GC CACTGATTTA (4) 26.1 0.0261 P8 Cb GC AACTTGATTA (4) 22.8 0.0228 P8 Cb GC GAGACTTCAA 3.3 0.0033 P8 Cb GC GTATTGTGAA 3.3 0.0033 P8 Cb GC ATTTCCCCCT (2) 1.6 0.0016 P8 Cb GC CAGCTGCTCA (3) 1.6 0.0016 P8 Cb GC CGCTGATTTA 1.6 0.0016 P8 Cb GC GGGTTTATAA 1.6 0.0016 Cb medulloblastoma CACTGATTTA (4) 39.3 0.0393 Cb medulloblastoma AACTTGATTA (4) 13.9 0.0139 Cb medulloblastoma GGGTTTTTAT (5) 9.2 0.0092 Cb medulloblastoma GAATGTCAAG 2.3 0.0023 Cb medulloblastoma GAGACTTCAA 2.3 0.0023 Cb medulloblastoma GCAACTTCAA 2.3 0.0023 Cb medulloblastoma GTATTGTGAA 2.3 0.0023 Cb medulloblastoma TGTTCTGATA (3) 2.3 0.0023 P8 GC+1d culture CACTGATTTA (4) 45.7 0.0457 P8 GC+1d culture GGGTTTTTAT (5) 34.2 0.0342 P8 GC+1d culture AACTTGATTA (4) 8 0.008 P8 GC+1d culture AAGAGAGGAA (2) 1.1 0.0011 P8 GC+1d culture ATCAGGGTGC (2) 1.1 0.0011 P8 GC+1d culture CACTGATTAA (2) 1.1 0.0011 P8 GC+1d culture GACACTACAG 1.1 0.0011 P8 GC+1d culture GAGACTTCAA 1.1 0.0011 P8 GC+1d culture GCTGCAGCCT (4) 1.1 0.0011 P8 GC+SHH+1d culture CACTGATTTA (4) 44.5 0.0445 P8 GC+SHH+1d culture GGGTTTTTAT (5) 42.2 0.0422 P8 GC+SHH+1d culture AACTTGATTA (4) 8.2 0.0082 P8 GC+SHH+1d culture ACCACAAATA 2.3 0.0023 P8 GC+SHH+1d culture CAGCTGCTCA (3) 2.3 0.0023 P8 GC+SHH+1d culture GAGACTTCAA 2.3 0.0023 P8 GC+SHH+1d culture ATTTCCCCCT (2) 1.2 0.0012 P8 GC+SHH+1d culture CAACTTCCCT (2) 1.2 0.0012 P8 GC+SHH+1d culture GAATGTCAAG 1.2 0.0012 3T3 fibroblasts CAGCTGCTCA (3) 7 0.007 3T3 fibroblasts CACTGATTTA (4) 3.5 0.0035 E15 cortex CACTGATTTA (4) 14.8 0.0148 E15 cortex GGGTTTTTAT (5) 14.8 0.0148 E15 cortex GACACTACAG 4.9 0.0049 P1 cortex GGGTTTTTAT (5) 50 0.05 P1 cortex CACTGATTTA (4) 27.3 0.0273 P1 cortex AACTTGATTA (4) 4.5 0.0045 P1 cortex GCTGCCCCTA (5) 4.5 0.0045 Hypothalamus CACTGATTTA (4) 58 0.058 Hypothalamus AACTTGATTA (4) 48.9 0.0489 Hypothalamus GGGTTTTTAT (5) 12.7 0.0127 Hypothalamus GAGACTTCAA 9.1 0.0091 Hypothalamus ACCACAAATA 3.6 0.0036 Hypothalamus TGTTCTGATA (3) 3.6 0.0036 Hypothalamus AAGAGAGGAA (2) 1.8 0.0018 Hypothalamus CAACTTCCCT (2) 1.8 0.0018 Hypothalamus CAGCTGCTCA (3) 1.8 0.0018 Hypothalamus GAATGTCAAG 1.8 0.0018 Hypothalamus GACACTACAG 1.8 0.0018 Hypothalamus GCAACTTCAA 1.8 0.0018 Hypothalamus TAGCCGTAGA (5) 1.8 0.0018 E12.5 retina GGGTTTTTAT (5) 41.3 0.0413 E12.5 retina CACTGATTTA (4) 28.2 0.0282 E12.5 retina AACTTGATTA (4) 20.7 0.0207 E12.5 retina GAGACTTCAA 3.8 0.0038 E12.5 retina AAGAGAGGAA (2) 1.9 0.0019 E12.5 retina ACCACAAATA 1.9 0.0019 E12.5 retina CAACTTCCCT (2) 1.9 0.0019 E12.5 retina GCTGCAGCCT (4) 1.9 0.0019 E12.5 retina GCTGCCCCTA (5) 1.9 0.0019 E14.5 retina GGGTTTTTAT (5) 114.8 0.1148 E14.5 retina AACTTGATTA (4) 34.6 0.0346 E14.5 retina CACTGATTTA (4) 31 0.031 E14.5 retina GAATGTCAAG 3.6 0.0036 E14.5 retina GAGACTTCAA 3.6 0.0036 E14.5 retina TAGCCGTAGA (5) 3.6 0.0036 E14.5 retina ATCAGGGTGC (2) 1.8 0.0018 E14.5 retina CAGCTGCTCA (3) 1.8 0.0018 E14.5 retina CCCTGATTTA (4) 1.8 0.0018 E14.5 retina GGGTTTATAA 1.8 0.0018 E16.5 retina GGGTTTTTAT (5) 86.9 0.0869 E16.5 retina CACTGATTTA (4) 38 0.038 E16.5 retina AACTTGATTA (4) 21.7 0.0217 E16.5 retina GAGACTTCAA 3.6 0.0036 E16.5 retina TGTTCTGATA (3) 3.6 0.0036 E16.5 retina ATCAGGGTGC (2) 1.8 0.0018 E16.5 retina ATTTCCCCCT (2) 1.8 0.0018 E16.5 retina CAGCTGCTCA (3) 1.8 0.0018 E16.5 retina CCCTGATTTA (4) 1.8 0.0018 E16.5 retina CGCTGATTTA 1.8 0.0018 E16.5 retina GAATGTCAAG 1.8 0.0018 E18.5 retina GGGTTTTTAT (5) 76.4 0.0764 E18.5 retina AACTTGATTA (4) 40 0.04 E18.5 retina CACTGATTTA (4) 30.9 0.0309 E18.5 retina CCCTGATTTA (4) 1.8 0.0018 E18.5 retina GAGACTTCAA 1.8 0.0018 E18.5 retina GCTGCAGCCT (4) 1.8 0.0018 P0.5 retina GGGTTTTTAT (5) 39.3 0.0393 P0.5 retina CACTGATTTA (4) 31.4 0.0314 P0.5 retina AACTTGATTA (4) 11.8 0.0118 P0.5 retina GACACTACAG 3.9 0.0039 P0.5 retina ACCACAAATA 2 0.002 P0.5 retina CCCTGATTTA (4) 2 0.002 P0.5 retina CGCTGATTTA 2 0.002 P2.5 retina GGGTTTTTAT (5) 58.1 0.0581 P2.5 retina CACTGATTTA (4) 37 0.037 P2.5 retina AACTTGATTA (4) 15.8 0.0158 P2.5 retina ACCACAAATA 3.5 0.0035 P2.5 retina GAGACTTCAA 3.5 0.0035 P2.5 retina CAACTTCCCT (2) 1.8 0.0018 P2.5 retina CAGCTGCTCA (3) 1.8 0.0018 P2.5 retina CGCTGATTTA 1.8 0.0018 P2.5 retina GAATGTCAAG 1.8 0.0018 P2.5 retina GACACTACAG 1.8 0.0018 P2.5 retina TAGCCGTAGA (5) 1.8 0.0018 P2.5 retina TTCTTAAAAT (3) 1.8 0.0018 P4.5 retina GGGTTTTTAT (5) 57.5 0.0575 P4.5 retina CACTGATTTA (4) 41.6 0.0416 P4.5 retina AACTTGATTA (4) 25.8 0.0258 P4.5 retina TAGCCGTAGA (5) 9.9 0.0099 P4.5 retina ACCACAAATA 2 0.002 P4.5 retina TTCTTAAAAT (3) 2 0.002 P6.5 retina CACTGATTTA (4) 56.7 0.0567 P6.5 retina GGGTTTTTAT (5) 35 0.035 P6.5 retina AACTTGATTA (4) 33.3 0.0333 P6.5 retina GAGACTTCAA 8.3 0.0083 P6.5 retina GCTGCAGCCT (4) 3.3 0.0033 P6.5 retina AAGAGAGGAA (2) 1.7 0.0017 P6.5 retina CAGCTGCTCA (3) 1.7 0.0017 P6.5 retina TAGCCGTAGA (5) 1.7 0.0017 P10.5 crx- retina CACTGATTTA (4) 37.2 0.0372 P10.5 crx- retina GGGTTTTTAT (5) 26 0.026 P10.5 crx- retina GAGACTTCAA 11.1 0.0111 P10.5 crx- retina CACTGATTAA (2) 5.6 0.0056 P10.5 crx- retina GAATGTCAAG 5.6 0.0056 P10.5 crx- retina CAGCTGCTCA (3) 3.7 0.0037 P10.5 crx- retina AACTTGATTA (4) 1.9 0.0019 P10.5 crx- retina ACCACAAATA 1.9 0.0019 P10.5 crx- retina ATTTCCCCCT (2) 1.9 0.0019 P10.5 crx- retina GACACTACAG 1.9 0.0019 P10.5 crx- retina GCTGCCCCTA (5) 1.9 0.0019 P10.5 crx+ retina CACTGATTTA (4) 46.1 0.0461 P10.5 crx+ retina GGGTTTTTAT (5) 19.2 0.0192 P10.5 crx+ retina CAGCTGCTCA (3) 5.8 0.0058 P10.5 crx+ retina TAGCCGTAGA (5) 3.8 0.0038 P10.5 crx+ retina AAGAGAGGAA (2) 1.9 0.0019 P10.5 crx+ retina ACCACAAATA 1.9 0.0019 P10.5 crx+ retina TTCTTAAAAT (3) 1.9 0.0019 Adult retinal CACTGATTTA (4) 16.7 0.0167 Adult retinal AACTTGATTA (4) 9.3 0.0093 Adult retinal GGGTTTTTAT (5) 7.4 0.0074 Adult retinal GAGACTTCAA 5.6 0.0056 Adult retinal CACTGATTAA (2) 1.9 0.0019 Adult retinal GCAACTTCAA 1.9 0.0019 Adult retinal GCTGCAGCCT (4) 1.9 0.0019 Adult retinal GCTGCCCCTA (5) 1.9 0.0019 Adult retinal GTATTGTGAA 1.9 0.0019 Adult retinal TGTTCTGATA (3) 1.9 0.0019 ONL AACTTGATTA (4) 15.3 0.0153 ONL GGGTTTTTAT (5) 15.3 0.0153 ONL CACTGATTTA (4) 5.7 0.0057 ONL CACTGATTAA (2) 1.9 0.0019 ONL GAATGTCAAG 1.9 0.0019 ONL GCTGCAGCCT (4) 1.9 0.0019