Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43640	4921506J03Rik	RIKEN cDNA 4921506J03 gene	10		382423
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 151 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTCCCTCTG (3) 16.3 0.0163 P8 Cb GC GCCAAGCCAG (4) 6.5 0.0065 P8 Cb GC CTGGGATCAT 4.9 0.0049 P8 Cb GC AACAGGTCGC (2) 1.6 0.0016 P8 Cb GC AAGAAGCCAG 1.6 0.0016 P8 Cb GC AGAGATTCTC (2) 1.6 0.0016 P8 Cb GC ATGTGCAGTC (2) 1.6 0.0016 P8 Cb GC CGATGGTGGG (2) 1.6 0.0016 P8 Cb GC GCCCACTCAC (3) 1.6 0.0016 Cb medulloblastoma CTGGGATCAT 6.9 0.0069 Cb medulloblastoma GCTCCCTCTG (3) 4.6 0.0046 Cb medulloblastoma AGAGATTCTC (2) 2.3 0.0023 P8 GC+1d culture GCTCCCTCTG (3) 14.8 0.0148 P8 GC+1d culture CTGGGATCAT 8 0.008 P8 GC+1d culture GCCCACTCAC (3) 5.7 0.0057 P8 GC+1d culture ACACTGCCTT (3) 2.3 0.0023 P8 GC+1d culture AACAGGTCGC (2) 1.1 0.0011 P8 GC+1d culture ATTCCAGGTG (2) 1.1 0.0011 P8 GC+1d culture CGATGGTGGG (2) 1.1 0.0011 P8 GC+1d culture GCAGAGCAGG (7) 1.1 0.0011 P8 GC+SHH+1d culture GCTCCCTCTG (3) 15.2 0.0152 P8 GC+SHH+1d culture CTGGGATCAT 12.9 0.0129 P8 GC+SHH+1d culture CGATGGTGGG (2) 4.7 0.0047 P8 GC+SHH+1d culture AACAGGTCGC (2) 1.2 0.0012 P8 GC+SHH+1d culture ACACTGCCTT (3) 1.2 0.0012 P8 GC+SHH+1d culture ATGTGCAGTC (2) 1.2 0.0012 P8 GC+SHH+1d culture CCTTGCCCCT (5) 1.2 0.0012 P8 GC+SHH+1d culture GCCAAGCCAG (4) 1.2 0.0012 P8 GC+SHH+1d culture GCCACGCCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGGAGGGAA (8) 1.2 0.0012 P8 GC+SHH+1d culture TGGCAGCTGG (9) 1.2 0.0012 3T3 fibroblasts GCCACGCCAG (2) 10.5 0.0105 3T3 fibroblasts GCCAAGCCAG (4) 7 0.007 3T3 fibroblasts AAGAAGCCAG 3.5 0.0035 3T3 fibroblasts ACACTGCCTT (3) 3.5 0.0035 3T3 fibroblasts AGAGATTCTC (2) 3.5 0.0035 3T3 fibroblasts CTGGGATCAT 3.5 0.0035 3T3 fibroblasts GCTCCCTCTG (3) 3.5 0.0035 E15 cortex GCTCCCTCTG (3) 24.7 0.0247 E15 cortex CTGGGATCAT 19.8 0.0198 E15 cortex GCCAAGCCAG (4) 9.9 0.0099 E15 cortex ATTCCAGGTG (2) 4.9 0.0049 E15 cortex GGGGAGGGAA (8) 4.9 0.0049 P1 cortex AGAGATTCTC (2) 18.2 0.0182 P1 cortex GCTCCCTCTG (3) 18.2 0.0182 P1 cortex CTGGGATCAT 13.6 0.0136 P1 cortex TGGCAGCTGG (9) 9.1 0.0091 P1 cortex ACACTGCCTT (3) 4.5 0.0045 P1 cortex CGATGGTGGG (2) 4.5 0.0045 Hypothalamus GCTCCCTCTG (3) 16.3 0.0163 Hypothalamus ATTCCAGGTG (2) 3.6 0.0036 Hypothalamus GCCCACTCAC (3) 3.6 0.0036 Hypothalamus AGTTCTTTCT 1.8 0.0018 Hypothalamus CCTTGCCCCT (5) 1.8 0.0018 Hypothalamus CGATGGTGGG (2) 1.8 0.0018 Hypothalamus CTGGGATCAT 1.8 0.0018 E12.5 retina GCTCCCTCTG (3) 22.5 0.0225 E12.5 retina AGAGATTCTC (2) 9.4 0.0094 E12.5 retina ATTCCAGGTG (2) 3.8 0.0038 E12.5 retina CTGGGATCAT 3.8 0.0038 E12.5 retina ACACTGCCTT (3) 1.9 0.0019 E12.5 retina AGTTCTTTCT 1.9 0.0019 E14.5 retina GCTCCCTCTG (3) 18.2 0.0182 E14.5 retina GCCAAGCCAG (4) 5.5 0.0055 E14.5 retina AGAGATTCTC (2) 3.6 0.0036 E14.5 retina AACAGGTCGC (2) 1.8 0.0018 E14.5 retina ACACTGCCTT (3) 1.8 0.0018 E14.5 retina CGATGGTGGG (2) 1.8 0.0018 E14.5 retina GCAGAGCAGG (7) 1.8 0.0018 E14.5 retina TGGCAGCTGG (9) 1.8 0.0018 E16.5 retina GCTCCCTCTG (3) 25.4 0.0254 E16.5 retina AGAGATTCTC (2) 10.9 0.0109 E16.5 retina CTGGGATCAT 10.9 0.0109 E16.5 retina GCAGAGCAGG (7) 5.4 0.0054 E16.5 retina ATGTGCAGTC (2) 3.6 0.0036 E16.5 retina ATTCCAGGTG (2) 3.6 0.0036 E16.5 retina GCCAAGCCAG (4) 3.6 0.0036 E16.5 retina AACAGGTCGC (2) 1.8 0.0018 E16.5 retina AGTTCTTTCT 1.8 0.0018 E16.5 retina CCTTGCCCCT (5) 1.8 0.0018 E16.5 retina CGATGGTGGG (2) 1.8 0.0018 E18.5 retina GCTCCCTCTG (3) 20 0.02 E18.5 retina AGTTCTTTCT 3.6 0.0036 E18.5 retina ACACTGCCTT (3) 1.8 0.0018 E18.5 retina CTGGGATCAT 1.8 0.0018 E18.5 retina GGGGGAAGGG (8) 1.8 0.0018 P0.5 retina CTGGGATCAT 19.6 0.0196 P0.5 retina GCTCCCTCTG (3) 13.7 0.0137 P0.5 retina AGAGATTCTC (2) 7.9 0.0079 P0.5 retina ATTCCAGGTG (2) 3.9 0.0039 P0.5 retina GCCAAGCCAG (4) 3.9 0.0039 P0.5 retina ACACTGCCTT (3) 2 0.002 P0.5 retina AGTTCTTTCT 2 0.002 P0.5 retina CGATGGTGGG (2) 2 0.002 P0.5 retina GCCCACTCAC (3) 2 0.002 P2.5 retina GCTCCCTCTG (3) 17.6 0.0176 P2.5 retina CTGGGATCAT 10.6 0.0106 P2.5 retina AGAGATTCTC (2) 5.3 0.0053 P2.5 retina ACACTGCCTT (3) 3.5 0.0035 P2.5 retina CGATGGTGGG (2) 3.5 0.0035 P2.5 retina TCTAAGTGTT 3.5 0.0035 P2.5 retina AACAGGTCGC (2) 1.8 0.0018 P2.5 retina GCAGAGCAGG (7) 1.8 0.0018 P4.5 retina GCTCCCTCTG (3) 31.7 0.0317 P4.5 retina CTGGGATCAT 13.9 0.0139 P4.5 retina ACACTGCCTT (3) 5.9 0.0059 P4.5 retina AACAGGTCGC (2) 2 0.002 P4.5 retina AGAGATTCTC (2) 2 0.002 P4.5 retina ATGTGCAGTC (2) 2 0.002 P4.5 retina GCCCACTCAC (3) 2 0.002 P6.5 retina GCTCCCTCTG (3) 28.3 0.0283 P6.5 retina CTGGGATCAT 8.3 0.0083 P6.5 retina GCCAAGCCAG (4) 6.7 0.0067 P6.5 retina AGAGATTCTC (2) 5 0.005 P6.5 retina ATGTGCAGTC (2) 3.3 0.0033 P6.5 retina GGCTGGTTAC 3.3 0.0033 P6.5 retina ACACTGCCTT (3) 1.7 0.0017 P6.5 retina ATTCCAGGTG (2) 1.7 0.0017 P6.5 retina CGATGGTGGG (2) 1.7 0.0017 P6.5 retina GCAGAGCAGG (7) 1.7 0.0017 P6.5 retina GGGGAGGGAA (8) 1.7 0.0017 P6.5 retina TCTAAGTGTT 1.7 0.0017 P10.5 crx- retina CTGGGATCAT 13 0.013 P10.5 crx- retina GCTCCCTCTG (3) 9.3 0.0093 P10.5 crx- retina ATTCCAGGTG (2) 3.7 0.0037 P10.5 crx- retina AACAGGTCGC (2) 1.9 0.0019 P10.5 crx- retina AGAGATTCTC (2) 1.9 0.0019 P10.5 crx- retina CGATGGTGGG (2) 1.9 0.0019 P10.5 crx- retina GCCAAGCCAG (4) 1.9 0.0019 P10.5 crx- retina GCCACGCCAG (2) 1.9 0.0019 P10.5 crx- retina GGGGGAAGGG (8) 1.9 0.0019 P10.5 crx+ retina GCTCCCTCTG (3) 17.3 0.0173 P10.5 crx+ retina CTGGGATCAT 5.8 0.0058 P10.5 crx+ retina GCAGAGCAGG (7) 3.8 0.0038 P10.5 crx+ retina GGGGGAAGGG (8) 3.8 0.0038 P10.5 crx+ retina AACAGGTCGC (2) 1.9 0.0019 P10.5 crx+ retina ATTCCAGGTG (2) 1.9 0.0019 P10.5 crx+ retina GCCCACTCAC (3) 1.9 0.0019 P10.5 crx+ retina GGCTGGTTAC 1.9 0.0019 Adult retinal CTGGGATCAT 5.6 0.0056 Adult retinal GCTCCCTCTG (3) 3.7 0.0037 Adult retinal ACACTGCCTT (3) 1.9 0.0019 Adult retinal AGAGATTCTC (2) 1.9 0.0019 Adult retinal AGTTCTTTCT 1.9 0.0019 Adult retinal ATTCCAGGTG (2) 1.9 0.0019 Adult retinal GGGGGAAGGG (8) 1.9 0.0019 ONL CTGGGATCAT 3.8 0.0038 ONL GCTCCCTCTG (3) 3.8 0.0038 ONL AGAGATTCTC (2) 1.9 0.0019 ONL ATGTGCAGTC (2) 1.9 0.0019 ONL CGATGGTGGG (2) 1.9 0.0019