Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4428	Prkrir	protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	7		72981
Gene Ontology	DNA binding | negative regulation of cell proliferation | nucleic acid binding | nucleus | protein binding | protein dimerization activity | regulation of translation | response to stress | signal transduction
Human Homolog	PRKRIR[protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTGTGTCTG (3) 8.2 0.0082 P8 Cb GC CTGAACTTCT (3) 1.6 0.0016 P8 Cb GC GGGCTCCAAC (4) 1.6 0.0016 Cb medulloblastoma ACTGTGTCTG (3) 6.9 0.0069 P8 GC+1d culture ACTGTGTCTG (3) 4.6 0.0046 P8 GC+1d culture GGGCTCCAAC (4) 2.3 0.0023 P8 GC+1d culture CTTTCCCATA (2) 1.1 0.0011 P8 GC+SHH+1d culture ACTGTGTCTG (3) 4.7 0.0047 P8 GC+SHH+1d culture GGGCTCCAAC (4) 1.2 0.0012 3T3 fibroblasts CTTTCCCATA (2) 3.5 0.0035 E15 cortex ACTGTGTCTG (3) 4.9 0.0049 P1 cortex CTTTCCCATA (2) 4.5 0.0045 Hypothalamus GGGCTCCAAC (4) 21.7 0.0217 Hypothalamus ACTGTGTCTG (3) 3.6 0.0036 Hypothalamus CTGAACTTCT (3) 1.8 0.0018 E12.5 retina ACTGTGTCTG (3) 1.9 0.0019 E12.5 retina CTGAACTTCT (3) 1.9 0.0019 E12.5 retina CTTTCCCATA (2) 1.9 0.0019 E14.5 retina ACTGTGTCTG (3) 7.3 0.0073 E14.5 retina CTTTCAATAC (2) 1.8 0.0018 E14.5 retina GGGCTCCAAC (4) 1.8 0.0018 E16.5 retina ACTGTGTCTG (3) 5.4 0.0054 E16.5 retina CTTTCAATAC (2) 1.8 0.0018 E18.5 retina ACTGTGTCTG (3) 1.8 0.0018 P0.5 retina ACTGTGTCTG (3) 11.8 0.0118 P0.5 retina GGGCTCCAAC (4) 2 0.002 P2.5 retina ACTGTGTCTG (3) 5.3 0.0053 P2.5 retina CTTTCCCATA (2) 3.5 0.0035 P2.5 retina GGGCTCCAAC (4) 1.8 0.0018 P4.5 retina ACTGTGTCTG (3) 2 0.002 P6.5 retina ACTGTGTCTG (3) 1.7 0.0017 P10.5 crx- retina ACTGTGTCTG (3) 7.4 0.0074 P10.5 crx- retina GGGCTCCAAC (4) 1.9 0.0019 P10.5 crx+ retina ACTGTGTCTG (3) 5.8 0.0058 P10.5 crx+ retina GGGCTCCAAC (4) 3.8 0.0038 P10.5 crx+ retina CTTTCAATAC (2) 1.9 0.0019 Adult retinal ACTGTGTCTG (3) 1.9 0.0019 ONL ACTGTGTCTG (3) 3.8 0.0038 ONL GGGCTCCAAC (4) 3.8 0.0038 ONL CTTTCCCATA (2) 1.9 0.0019