Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.46176
Ppp1r11
protein phosphatase 1, regulatory (inhibitor) subunit 11
17
17 19.86 cM
76497
Human Homolog
PPP1R11[protein phosphatase 1, regulatory (inhibitor) subunit 11]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGACTCCAA
(
2
)
TGTCTGCCTG
(
3
)
4.9
0.0049
Cb medulloblastoma
GGGACTCCAA
(
2
)
GGGACTCCAC
TGTCTGCCTG
(
3
)
16.2
0.0162
P8 GC+1d culture
AATGGTGAGA
GGGACTCCAA
(
2
)
3.4
0.0034
P8 GC+SHH+1d culture
GGGACTCCAA
(
2
)
GGGACTCCAC
8.2
0.0082
3T3 fibroblasts
TGTCTGCCTG
(
3
)
3.5
0.0035
E15 cortex
GCGGAGACAG
GGGACTCCAA
(
2
)
9.8
0.0098
Hypothalamus
GGGACTCCAA
(
2
)
16.3
0.0163
E12.5 retina
GGGACTCCAA
(
2
)
7.5
0.0075
E14.5 retina
GGGACTCCAA
(
2
)
GGGACTCCAC
7.3
0.0073
E16.5 retina
GCGGAGACAG
GGGACTCCAA
(
2
)
GGGACTCCAC
TGTCTGCCTG
(
3
)
12.6
0.0126
E18.5 retina
GGGACTCCAA
(
2
)
TGTCTGCCTG
(
3
)
16.4
0.0164
P0.5 retina
GGGACTCCAA
(
2
)
GGGACTCCAC
5.9
0.0059
P2.5 retina
GGGACTCCAA
(
2
)
GGGACTCCAC
7
0.007
P4.5 retina
GGGACTCCAA
(
2
)
TGTCTGCCTG
(
3
)
4
0.004
P6.5 retina
GCGGAGACAG
GGGACTCCAA
(
2
)
GGGACTCCAC
11.7
0.0117
P10.5 crx- retina
AATGGTGAGA
GGGACTCCAA
(
2
)
5.6
0.0056
P10.5 crx+ retina
GGGACTCCAA
(
2
)
GGGACTCCAC
9.6
0.0096
Adult retinal
AATGGTGAGA
GGGACTCCAC
3.8
0.0038
ONL
GGGACTCCAA
(
2
)
5.7
0.0057
