Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.100084
BC018473
cDNA sequence BC018473
11
193217
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAAGGAAAC (
7
)
8.2
0.0082
P8 Cb GC
AGTGGGGTCT
(
3
)
4.9
0.0049
P8 Cb GC
AGCTGGAAGT
(
3
)
1.6
0.0016
Cb medulloblastoma
GAAAGGAAAC (
7
)
13.9
0.0139
Cb medulloblastoma
AGTGGGGTCT
(
3
)
6.9
0.0069
P8 GC+1d culture
GAAAGGAAAC (
7
)
13.7
0.0137
P8 GC+1d culture
AGTGGGGTCT
(
3
)
2.3
0.0023
P8 GC+1d culture
TGATTGCTGG (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAAGGAAAC (
7
)
24.6
0.0246
P8 GC+SHH+1d culture
AGTGGGGTCT
(
3
)
9.4
0.0094
3T3 fibroblasts
GAAAGGAAAC (
7
)
3.5
0.0035
3T3 fibroblasts
TGATTGCTGG (
6
)
3.5
0.0035
E15 cortex
AGTGGGGTCT
(
3
)
4.9
0.0049
P1 cortex
AGTGGGGTCT
(
3
)
4.5
0.0045
Hypothalamus
AGTGGGGTCT
(
3
)
5.4
0.0054
Hypothalamus
TGATTGCTGG (
6
)
3.6
0.0036
Hypothalamus
AGCTGGAAGT
(
3
)
1.8
0.0018
E12.5 retina
GAAAGGAAAC (
7
)
37.5
0.0375
E12.5 retina
AGCTGGAAGT
(
3
)
1.9
0.0019
E12.5 retina
AGTGGGGTCT
(
3
)
1.9
0.0019
E14.5 retina
TGATTGCTGG (
6
)
20
0.02
E14.5 retina
GAAAGGAAAC (
7
)
18.2
0.0182
E14.5 retina
AGTGGGGTCT
(
3
)
3.6
0.0036
E16.5 retina
GAAAGGAAAC (
7
)
18.1
0.0181
E16.5 retina
TGATTGCTGG (
6
)
16.3
0.0163
E16.5 retina
AGTGGGGTCT
(
3
)
1.8
0.0018
E18.5 retina
GAAAGGAAAC (
7
)
20
0.02
E18.5 retina
AGTGGGGTCT
(
3
)
3.6
0.0036
P0.5 retina
GAAAGGAAAC (
7
)
5.9
0.0059
P0.5 retina
TGATTGCTGG (
6
)
2
0.002
P2.5 retina
GAAAGGAAAC (
7
)
19.4
0.0194
P2.5 retina
AGTGGGGTCT
(
3
)
5.3
0.0053
P4.5 retina
GAAAGGAAAC (
7
)
5.9
0.0059
P4.5 retina
AGTGGGGTCT
(
3
)
4
0.004
P6.5 retina
GAAAGGAAAC (
7
)
8.3
0.0083
P6.5 retina
TGATTGCTGG (
6
)
8.3
0.0083
P6.5 retina
AGCTGGAAGT
(
3
)
1.7
0.0017
P6.5 retina
AGTGGGGTCT
(
3
)
1.7
0.0017
P10.5 crx- retina
GAAAGGAAAC (
7
)
5.6
0.0056
P10.5 crx- retina
TGATTGCTGG (
6
)
3.7
0.0037
P10.5 crx+ retina
AGTGGGGTCT
(
3
)
5.8
0.0058
P10.5 crx+ retina
GAAAGGAAAC (
7
)
3.8
0.0038
Adult retinal
TGATTGCTGG (
6
)
7.4
0.0074
Adult retinal
AGTGGGGTCT
(
3
)
1.9
0.0019
ONL
TGATTGCTGG (
6
)
11.5
0.0115
ONL
GAAAGGAAAC (
7
)
3.8
0.0038
ONL
AGTGGGGTCT
(
3
)
1.9
0.0019
