Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.100622
6620401K05Rik
RIKEN cDNA 6620401K05 gene
9
235610
Gene Ontology
DNA repair
|
nucleus
Human Homolog
TREX1[three prime repair exonuclease 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 21 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATGTGACTGA
(
2
)
1.6
0.0016
P8 Cb GC
CTGATTCGAG
1.6
0.0016
Cb medulloblastoma
GTTGGAAAAA (
4
)
4.6
0.0046
Cb medulloblastoma
ATGTGACTGA
(
2
)
2.3
0.0023
P8 GC+1d culture
CTGACCCCTG
(
2
)
1.1
0.0011
3T3 fibroblasts
GGTCTGCCTG
(
4
)
3.5
0.0035
P1 cortex
ATGTGACTGA
(
2
)
4.5
0.0045
P1 cortex
CTGATTCGAG
4.5
0.0045
Hypothalamus
CTGACCCCTG
(
2
)
1.8
0.0018
Hypothalamus
GGTCTGCCTG
(
4
)
1.8
0.0018
E14.5 retina
GTTGGAAAAA (
4
)
1.8
0.0018
E16.5 retina
GTTGGAAAAA (
4
)
1.8
0.0018
E18.5 retina
GTTGGAAAAA (
4
)
1.8
0.0018
P0.5 retina
CTGATTCGAG
5.9
0.0059
P2.5 retina
GGGACAGAAG (
4
)
1.8
0.0018
P6.5 retina
CTGACCCCTG
(
2
)
1.7
0.0017
P6.5 retina
CTGATTCGAG
1.7
0.0017
P10.5 crx+ retina
GTTGGAAAAA (
4
)
1.9
0.0019
Adult retinal
GGGACAGAAG (
4
)
3.7
0.0037
Adult retinal
GGTCTGCCTG
(
4
)
1.9
0.0019
ONL
GGGACAGAAG (
4
)
7.7
0.0077
