Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.100641	Mitf	microphthalmia-associated transcription factor	6	6 40.0 cM	17342
Gene Ontology	development | DNA binding | hearing | nucleus | nucleus | positive regulation of transcription, DNA-dependent | regulation of apoptosis | regulation of cell proliferation | regulation of osteoclast differentiation | regulation of osteoclast differentiation | regulation of transcription, DNA-dependent | transcription factor activity | Wnt receptor signaling pathway
Human Homolog	MITF[microphthalmia-associated transcription factor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 20 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTTTCCAG (8) 3.3 0.0033 Cb medulloblastoma GGCTTTCCAG (8) 2.3 0.0023 P8 GC+1d culture GGCTTTCCAG (8) 3.4 0.0034 P8 GC+SHH+1d culture ATGCAGTTCA (2) 3.5 0.0035 3T3 fibroblasts GGCTTTCCAG (8) 3.5 0.0035 E15 cortex ATGCAGTTCA (2) 9.9 0.0099 Hypothalamus GGCTTTCCAG (8) 1.8 0.0018 E12.5 retina GGCTTTCCAG (8) 1.9 0.0019 E16.5 retina GGCTTTCCAG (8) 1.8 0.0018 E18.5 retina GGCTTTCCAG (8) 1.8 0.0018 P0.5 retina ATGCAGTTCA (2) 5.9 0.0059 P0.5 retina GGCTTTCCAG (8) 2 0.002 P2.5 retina GGCTTTCCAG (8) 5.3 0.0053 P4.5 retina ATGCAGTTCA (2) 2 0.002 P4.5 retina GGCTTTCCAG (8) 2 0.002 P10.5 crx- retina GGCTTTCCAG (8) 1.9 0.0019 P10.5 crx+ retina GGCTTTCCAG (8) 5.8 0.0058 Adult retinal ATGCAGTTCA (2) 3.7 0.0037 Adult retinal GGCTTTCCAG (8) 3.7 0.0037 ONL GGCTTTCCAG (8) 1.9 0.0019