Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.100665	D1Ertd251e	DNA segment, Chr 1, ERATO Doi 251, expressed	1	1 86.6 cM	27878
Human Homolog	STAF42[SPT3-associated factor 42]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAATAAAC (5) 24.5 0.0245 P8 Cb GC ACCGTGACTC (5) 1.6 0.0016 Cb medulloblastoma ACAAATAAAC (5) 18.5 0.0185 Cb medulloblastoma ATGCTTCTCA (2) 2.3 0.0023 Cb medulloblastoma CCTGCCCTCT (4) 2.3 0.0023 P8 GC+1d culture ACAAATAAAC (5) 19.4 0.0194 P8 GC+1d culture TCTTTAATCC (30) 2.3 0.0023 P8 GC+1d culture ATGCTTCTCA (2) 1.1 0.0011 P8 GC+1d culture CCTGCCCTCT (4) 1.1 0.0011 P8 GC+1d culture CTCTGCTACA (2) 1.1 0.0011 P8 GC+SHH+1d culture ACAAATAAAC (5) 38.6 0.0386 P8 GC+SHH+1d culture TCTTTAATCC (30) 4.7 0.0047 P8 GC+SHH+1d culture ACCGTGACTC (5) 2.3 0.0023 P8 GC+SHH+1d culture ATGCTTCTCA (2) 2.3 0.0023 3T3 fibroblasts TCTTTAATCC (30) 7 0.007 E15 cortex ACAAATAAAC (5) 4.9 0.0049 E15 cortex CCTGCCCTCT (4) 4.9 0.0049 E15 cortex TCTTTAATCC (30) 4.9 0.0049 P1 cortex ACAAATAAAC (5) 9.1 0.0091 P1 cortex ATGCTTCTCA (2) 9.1 0.0091 P1 cortex TCTTTAATCC (30) 9.1 0.0091 P1 cortex ACCGTGACTC (5) 4.5 0.0045 Hypothalamus ACAAATAAAC (5) 7.2 0.0072 Hypothalamus ACCGTGACTC (5) 1.8 0.0018 Hypothalamus ATGCTTCTCA (2) 1.8 0.0018 E12.5 retina ACAAATAAAC (5) 31.9 0.0319 E12.5 retina CTCTGCTACA (2) 1.9 0.0019 E14.5 retina ACAAATAAAC (5) 29.2 0.0292 E14.5 retina TCTTTAATCC (30) 21.9 0.0219 E14.5 retina AAACTCTGGC (3) 3.6 0.0036 E14.5 retina ACCGTGACTC (5) 1.8 0.0018 E16.5 retina ACAAATAAAC (5) 30.8 0.0308 E16.5 retina TCTTTAATCC (30) 9.1 0.0091 E16.5 retina ACCGTGACTC (5) 1.8 0.0018 E18.5 retina ACAAATAAAC (5) 50.9 0.0509 E18.5 retina ATGCTTCTCA (2) 1.8 0.0018 E18.5 retina TCTTTAATCC (30) 1.8 0.0018 P0.5 retina ACAAATAAAC (5) 13.7 0.0137 P0.5 retina ATGCTTCTCA (2) 2 0.002 P0.5 retina CCTGCCCTCT (4) 2 0.002 P0.5 retina TCTTTAATCC (30) 2 0.002 P2.5 retina ACAAATAAAC (5) 21.1 0.0211 P2.5 retina ACCGTGACTC (5) 1.8 0.0018 P2.5 retina TCTTTAATCC (30) 1.8 0.0018 P4.5 retina ACAAATAAAC (5) 31.7 0.0317 P4.5 retina TCTTTAATCC (30) 9.9 0.0099 P4.5 retina ACCGTGACTC (5) 2 0.002 P4.5 retina ATGCTTCTCA (2) 2 0.002 P4.5 retina GGACTGAGGG (6) 2 0.002 P6.5 retina ACAAATAAAC (5) 30 0.03 P6.5 retina ACCGTGACTC (5) 1.7 0.0017 P6.5 retina ATGCTTCTCA (2) 1.7 0.0017 P10.5 crx- retina ACAAATAAAC (5) 9.3 0.0093 P10.5 crx- retina GGACTGAGGG (6) 3.7 0.0037 P10.5 crx- retina ACCGTGACTC (5) 1.9 0.0019 P10.5 crx- retina ATGCTTCTCA (2) 1.9 0.0019 P10.5 crx- retina CCTGCCCTCT (4) 1.9 0.0019 P10.5 crx- retina TCTTTAATCC (30) 1.9 0.0019 P10.5 crx+ retina ACAAATAAAC (5) 21.1 0.0211 P10.5 crx+ retina TCTTTAATCC (30) 1.9 0.0019 Adult retinal TCTTTAATCC (30) 7.4 0.0074 Adult retinal ACAAATAAAC (5) 1.9 0.0019 Adult retinal ATGCTTCTCA (2) 1.9 0.0019 Adult retinal CTCTGCTACA (2) 1.9 0.0019 ONL TCTTTAATCC (30) 13.4 0.0134 ONL AAACTCTGGC (3) 1.9 0.0019 ONL ACAAATAAAC (5) 1.9 0.0019 ONL ACCGTGACTC (5) 1.9 0.0019 ONL ATGCTTCTCA (2) 1.9 0.0019