Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.100940	Comt	catechol-O-methyltransferase	16	16 11.2 cM	12846
Gene Ontology	catecholamine metabolism | dopamine catabolism | extracellular space | integral to membrane | magnesium ion binding | methyltransferase activity | neurotransmitter catabolism | O-methyltransferase activity | S-adenosylmethionine-dependent methyltransferase activity | transferase activity
Human Homolog	COMT[catechol-O-methyltransferase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GTCTTTTCTG (4) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GTCTTTTCTG (4) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture ATCCCTACTG (4) 1.1 0.0011 P8 GC+1d culture TTTGGCTTTA (7) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture TTTGGCTTTA (7) 3.5 0.0035 P8 GC+SHH+1d culture ATCCCTACTG (4) 1.2 0.0012 P8 GC+SHH+1d culture CAAACCACTA (3) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts CAAACCACTA (3) 7 0.007 3T3 fibroblasts GCGGCGATGG (2) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GGTCTTTTCT (6) 9.9 0.0099 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus CAAACCACTA (3) 3.6 0.0036 Hypothalamus ATCCCTACTG (4) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina CAAACCACTA (3) 1.9 0.0019 E12.5 retina GCGGCGATGG (2) 1.9 0.0019 E12.5 retina GTCTTTTCTG (4) 1.9 0.0019 E12.5 retina TTTGGCTTTA (7) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina ATCCCTACTG (4) 3.6 0.0036 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GCGGCGATGG (2) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina ATCCCTACTG (4) 1.8 0.0018 E18.5 retina CAAACCACTA (3) 1.8 0.0018 E18.5 retina GGTCTTTTCT (6) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina ATCCCTACTG (4) 2 0.002 P4.5 retina CAAACCACTA (3) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina AAAAGTGGGG (3) 3.3 0.0033 P6.5 retina ATCCCTACTG (4) 1.7 0.0017 P6.5 retina GGTCTTTTCT (6) 1.7 0.0017 P6.5 retina TTTGGCTTTA (7) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina ATCCCTACTG (4) 1.9 0.0019 P10.5 crx- retina CAAACCACTA (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina AAAAGTGGGG (3) 3.8 0.0038 P10.5 crx+ retina ATCCCTACTG (4) 3.8 0.0038 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal AAAAGTGGGG (3) 7.4 0.0074 Adult retinal CAAACCACTA (3) 1.9 0.0019 Adult retinal TTTGGCTTTA (7) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL AAAAGTGGGG (3) 5.7 0.0057 ONL ATCCCTACTG (4) 3.8 0.0038 ONL GGTCTTTTCT (6) 1.9 0.0019