Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.101034
Tgif
TG interacting factor
17
21815
Mm.101034
C230073G13Rik
RIKEN cDNA C230073G13 gene
17
320430
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAAAAAAAA (
69
)
8.2
0.0082
P8 Cb GC
ATGTAATAAA
(
3
)
6.5
0.0065
P8 Cb GC
GGATGCTCAG (
4
)
3.3
0.0033
P8 Cb GC
TTCTTTCCTG (
7
)
1.6
0.0016
Cb medulloblastoma
GGAAAAAAAA (
69
)
41.6
0.0416
Cb medulloblastoma
GGATGCTCAG (
4
)
4.6
0.0046
P8 GC+1d culture
GGAAAAAAAA (
69
)
5.7
0.0057
P8 GC+1d culture
ATGTAATAAA
(
3
)
3.4
0.0034
P8 GC+1d culture
ATGTAATAAG (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
ATGTAATAAA
(
3
)
8.2
0.0082
P8 GC+SHH+1d culture
GGAAAAAAAA (
69
)
7
0.007
P8 GC+SHH+1d culture
ATACTGGGAA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
ATGTAATAAG (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTCTTTCCTG (
7
)
1.2
0.0012
E15 cortex
GGAAAAAAAA (
69
)
9.9
0.0099
P1 cortex
GGAAAAAAAA (
69
)
4.5
0.0045
Hypothalamus
GGAAAAAAAA (
69
)
14.5
0.0145
E12.5 retina
ATGTAATAAA
(
3
)
5.6
0.0056
E12.5 retina
GGAAAAAAAA (
69
)
1.9
0.0019
E14.5 retina
ATGTAATAAA
(
3
)
10.9
0.0109
E14.5 retina
GGAAAAAAAA (
69
)
10.9
0.0109
E14.5 retina
TTCTTTCCTG (
7
)
1.8
0.0018
E16.5 retina
ATGTAATAAA
(
3
)
3.6
0.0036
E16.5 retina
ATACTGGGAA
(
2
)
1.8
0.0018
E16.5 retina
GGAAAAAAAA (
69
)
1.8
0.0018
E18.5 retina
GGAAAAAAAA (
69
)
16.4
0.0164
E18.5 retina
ATGTAATAAA
(
3
)
5.5
0.0055
E18.5 retina
ATACTGGGAA
(
2
)
1.8
0.0018
P0.5 retina
GGAAAAAAAA (
69
)
13.7
0.0137
P0.5 retina
ATGTAATAAA
(
3
)
2
0.002
P2.5 retina
GGAAAAAAAA (
69
)
7
0.007
P2.5 retina
ATGTAATAAA
(
3
)
3.5
0.0035
P2.5 retina
ATGTAATAAG (
3
)
1.8
0.0018
P4.5 retina
GGAAAAAAAA (
69
)
13.9
0.0139
P4.5 retina
ATGTAATAAA
(
3
)
4
0.004
P6.5 retina
GGAAAAAAAA (
69
)
13.3
0.0133
P10.5 crx- retina
GGAAAAAAAA (
69
)
3.7
0.0037
P10.5 crx- retina
GGATGCTCAG (
4
)
3.7
0.0037
P10.5 crx+ retina
GGAAAAAAAA (
69
)
15.4
0.0154
P10.5 crx+ retina
GGATGCTCAG (
4
)
1.9
0.0019
Adult retinal
GGAAAAAAAA (
69
)
5.6
0.0056
Adult retinal
GGATGCTCAG (
4
)
1.9
0.0019
ONL
GGAAAAAAAA (
69
)
17.2
0.0172
