Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.101141
Rnf121
ring finger protein 121
7
75212
Mm.101141
3010009O07Rik
RIKEN cDNA 3010009O07 gene
7
76847
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGTTGAAA (
8
)
9.8
0.0098
P8 Cb GC
CAGCAATAAA (
3
)
8.2
0.0082
P8 Cb GC
AGCTGGCTGC
(
6
)
1.6
0.0016
P8 Cb GC
GCTTCTGTAA (
8
)
1.6
0.0016
Cb medulloblastoma
CAGCAATAAA (
3
)
18.5
0.0185
Cb medulloblastoma
AGCTGGCTGC
(
6
)
6.9
0.0069
Cb medulloblastoma
GTGGTTGAAA (
8
)
4.6
0.0046
P8 GC+1d culture
CAGCAATAAA (
3
)
9.1
0.0091
P8 GC+1d culture
GTGGTTGAAA (
8
)
6.8
0.0068
P8 GC+1d culture
AGCTGGCTGC
(
6
)
3.4
0.0034
P8 GC+1d culture
GCTTCTGTAA (
8
)
1.1
0.0011
P8 GC+1d culture
TCTGCTTCTT (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGCAATAAA (
3
)
10.5
0.0105
P8 GC+SHH+1d culture
GTGGTTGAAA (
8
)
9.4
0.0094
P8 GC+SHH+1d culture
AGCTGGCTGC
(
6
)
8.2
0.0082
P8 GC+SHH+1d culture
AATTCTGGAT (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TCTGCTTCTT (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GCTTCTGTAA (
8
)
1.2
0.0012
3T3 fibroblasts
AGCTGGCTGC
(
6
)
3.5
0.0035
3T3 fibroblasts
GCTTCTGTAA (
8
)
3.5
0.0035
E15 cortex
GTGGTTGAAA (
8
)
34.6
0.0346
E15 cortex
AGCTGGCTGC
(
6
)
9.9
0.0099
E15 cortex
TCTGCTTCTT (
7
)
9.9
0.0099
P1 cortex
GTGGTTGAAA (
8
)
9.1
0.0091
P1 cortex
AGCTGGCTGC
(
6
)
4.5
0.0045
P1 cortex
CAGCAATAAA (
3
)
4.5
0.0045
P1 cortex
TCTGCTTCTT (
7
)
4.5
0.0045
Hypothalamus
CAGCAATAAA (
3
)
16.3
0.0163
Hypothalamus
GTGGTTGAAA (
8
)
14.5
0.0145
Hypothalamus
AGCTGGCTGC
(
6
)
5.4
0.0054
E12.5 retina
GTGGTTGAAA (
8
)
28.2
0.0282
E12.5 retina
AGCTGGCTGC
(
6
)
5.6
0.0056
E12.5 retina
AATTCTGGAT (
6
)
1.9
0.0019
E12.5 retina
CAGCAATAAA (
3
)
1.9
0.0019
E14.5 retina
GTGGTTGAAA (
8
)
23.7
0.0237
E14.5 retina
CAGCAATAAA (
3
)
12.8
0.0128
E14.5 retina
AGCTGGCTGC
(
6
)
5.5
0.0055
E16.5 retina
GTGGTTGAAA (
8
)
23.5
0.0235
E16.5 retina
CAGCAATAAA (
3
)
9.1
0.0091
E16.5 retina
AGCTGGCTGC
(
6
)
3.6
0.0036
E18.5 retina
GTGGTTGAAA (
8
)
61.8
0.0618
E18.5 retina
CAGCAATAAA (
3
)
20
0.02
E18.5 retina
AGCTGGCTGC
(
6
)
10.9
0.0109
P0.5 retina
GTGGTTGAAA (
8
)
17.7
0.0177
P0.5 retina
CAGCAATAAA (
3
)
9.8
0.0098
P0.5 retina
AGCTGGCTGC
(
6
)
2
0.002
P2.5 retina
GTGGTTGAAA (
8
)
19.4
0.0194
P2.5 retina
CAGCAATAAA (
3
)
14.1
0.0141
P2.5 retina
AGCTGGCTGC
(
6
)
3.5
0.0035
P2.5 retina
GCTTCTGTAA (
8
)
1.8
0.0018
P4.5 retina
CAGCAATAAA (
3
)
17.8
0.0178
P4.5 retina
GTGGTTGAAA (
8
)
17.8
0.0178
P4.5 retina
AGCTGGCTGC
(
6
)
4
0.004
P6.5 retina
CAGCAATAAA (
3
)
25
0.025
P6.5 retina
GTGGTTGAAA (
8
)
11.7
0.0117
P6.5 retina
AGCTGGCTGC
(
6
)
1.7
0.0017
P10.5 crx- retina
CAGCAATAAA (
3
)
9.3
0.0093
P10.5 crx- retina
AGCTGGCTGC
(
6
)
1.9
0.0019
P10.5 crx- retina
GTGGTTGAAA (
8
)
1.9
0.0019
P10.5 crx- retina
TCTGCTTCTT (
7
)
1.9
0.0019
P10.5 crx+ retina
CAGCAATAAA (
3
)
13.5
0.0135
P10.5 crx+ retina
AGCTGGCTGC
(
6
)
11.5
0.0115
P10.5 crx+ retina
GTGGTTGAAA (
8
)
3.8
0.0038
Adult retinal
CAGCAATAAA (
3
)
11.1
0.0111
Adult retinal
AGCTGGCTGC
(
6
)
5.6
0.0056
Adult retinal
GTGGTTGAAA (
8
)
3.7
0.0037
ONL
CAGCAATAAA (
3
)
5.7
0.0057
ONL
AGCTGGCTGC
(
6
)
3.8
0.0038
ONL
GCTTCTGTAA (
8
)
1.9
0.0019
