Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.101274
2010008E23Rik
RIKEN cDNA 2010008E23 gene
11
72053
Human Homolog
MGC3123[hypothetical protein MGC3123]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 92 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTGCTGGTG
(
9
)
13.1
0.0131
P8 Cb GC
AGGGCAGAGG
(
3
)
8.2
0.0082
P8 Cb GC
AAGAAATGGA (
5
)
3.3
0.0033
P8 Cb GC
CTGGGGTCAT
(
3
)
1.6
0.0016
P8 Cb GC
GAGCTCTCTG (
2
)
1.6
0.0016
P8 Cb GC
GCCTTAGCAT
(
3
)
1.6
0.0016
P8 Cb GC
TCTGCTGGTG (
3
)
1.6
0.0016
P8 Cb GC
TGGACCAGCT
(
9
)
1.6
0.0016
Cb medulloblastoma
GCTGCTGGTG
(
9
)
23.1
0.0231
Cb medulloblastoma
AGGGCAGAGG
(
3
)
6.9
0.0069
Cb medulloblastoma
GAGCTCTCTG (
2
)
2.3
0.0023
Cb medulloblastoma
TGGACCAGCT
(
9
)
2.3
0.0023
P8 GC+1d culture
GCTGCTGGTG
(
9
)
16
0.016
P8 GC+1d culture
GCCTTAGCAT
(
3
)
4.6
0.0046
P8 GC+1d culture
GAGCTCTCTG (
2
)
3.4
0.0034
P8 GC+1d culture
AAGAAATGGA (
5
)
2.3
0.0023
P8 GC+1d culture
ATAGGATACA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GCTGCTGGTG
(
9
)
8.2
0.0082
P8 GC+SHH+1d culture
AGGGCAGAGG
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
AAGAAATGGA (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GAGCTCTCTG (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GCCTTAGCAT
(
3
)
1.2
0.0012
3T3 fibroblasts
GAGCTCTCTG (
2
)
3.5
0.0035
3T3 fibroblasts
GCCTTAGCAT
(
3
)
3.5
0.0035
3T3 fibroblasts
GCTGCTGGTG
(
9
)
3.5
0.0035
3T3 fibroblasts
TGGACCAGCT
(
9
)
3.5
0.0035
3T3 fibroblasts
TTGCTGAGGG
(
4
)
3.5
0.0035
E15 cortex
GCTGCTGGTG
(
9
)
14.8
0.0148
E15 cortex
CTGGGGTCAT
(
3
)
4.9
0.0049
E15 cortex
TCTGCTGGTG (
3
)
4.9
0.0049
E15 cortex
TTGCTGAGGG
(
4
)
4.9
0.0049
P1 cortex
GCTGCTGGTG
(
9
)
13.6
0.0136
P1 cortex
AGGGCAGAGG
(
3
)
9.1
0.0091
P1 cortex
GCCTTAGCAT
(
3
)
9.1
0.0091
P1 cortex
GAGCTCTCTG (
2
)
4.5
0.0045
P1 cortex
TCTGCTGGTG (
3
)
4.5
0.0045
Hypothalamus
GCTGCTGGTG
(
9
)
18.1
0.0181
Hypothalamus
AGGGCAGAGG
(
3
)
9.1
0.0091
Hypothalamus
CTGGGGTCAT
(
3
)
3.6
0.0036
Hypothalamus
GAGCTCTCTG (
2
)
1.8
0.0018
E12.5 retina
GCTGCTGGTG
(
9
)
5.6
0.0056
E12.5 retina
AGGGCAGAGG
(
3
)
3.8
0.0038
E12.5 retina
ATAGGATACA
(
2
)
1.9
0.0019
E14.5 retina
GCTGCTGGTG
(
9
)
14.6
0.0146
E14.5 retina
ATAGGATACA
(
2
)
3.6
0.0036
E14.5 retina
AAGAAATGGA (
5
)
1.8
0.0018
E14.5 retina
AGGGCAGAGG
(
3
)
1.8
0.0018
E14.5 retina
GAGCTCTCTG (
2
)
1.8
0.0018
E14.5 retina
TCTGCTGGTG (
3
)
1.8
0.0018
E14.5 retina
TTGCTGAGGG
(
4
)
1.8
0.0018
E16.5 retina
GCTGCTGGTG
(
9
)
12.7
0.0127
E16.5 retina
GCCTTAGCAT
(
3
)
5.4
0.0054
E16.5 retina
GAGCTCTCTG (
2
)
1.8
0.0018
E18.5 retina
GCTGCTGGTG
(
9
)
34.6
0.0346
E18.5 retina
AGGGCAGAGG
(
3
)
3.6
0.0036
E18.5 retina
CTGGGGTCAT
(
3
)
1.8
0.0018
E18.5 retina
GAGCTCTCTG (
2
)
1.8
0.0018
E18.5 retina
GCCTTAGCAT
(
3
)
1.8
0.0018
E18.5 retina
TTGCTGAGGG
(
4
)
1.8
0.0018
P0.5 retina
GCTGCTGGTG
(
9
)
5.9
0.0059
P0.5 retina
GCCTTAGCAT
(
3
)
3.9
0.0039
P0.5 retina
GAGCTCTCTG (
2
)
2
0.002
P0.5 retina
TCTGCTGGTG (
3
)
2
0.002
P2.5 retina
GCTGCTGGTG
(
9
)
17.6
0.0176
P2.5 retina
AGGGCAGAGG
(
3
)
5.3
0.0053
P2.5 retina
GAGCTCTCTG (
2
)
5.3
0.0053
P2.5 retina
TCTGCTGGTG (
3
)
3.5
0.0035
P2.5 retina
TTGCTGAGGG
(
4
)
3.5
0.0035
P2.5 retina
AAGAAATGGA (
5
)
1.8
0.0018
P4.5 retina
AGGGCAGAGG
(
3
)
21.8
0.0218
P4.5 retina
GCTGCTGGTG
(
9
)
19.8
0.0198
P4.5 retina
GCCTTAGCAT
(
3
)
2
0.002
P4.5 retina
TTGCTGAGGG
(
4
)
2
0.002
P6.5 retina
GCTGCTGGTG
(
9
)
15
0.015
P6.5 retina
AGGGCAGAGG
(
3
)
3.3
0.0033
P6.5 retina
ATAGGATACA
(
2
)
3.3
0.0033
P6.5 retina
GCCTTAGCAT
(
3
)
3.3
0.0033
P6.5 retina
AAGAAATGGA (
5
)
1.7
0.0017
P6.5 retina
TTGCTGAGGG
(
4
)
1.7
0.0017
P10.5 crx- retina
GCTGCTGGTG
(
9
)
3.7
0.0037
P10.5 crx- retina
TCTGCTGGTG (
3
)
3.7
0.0037
P10.5 crx+ retina
GCTGCTGGTG
(
9
)
28.8
0.0288
P10.5 crx+ retina
GAGCTCTCTG (
2
)
3.8
0.0038
P10.5 crx+ retina
AGGGCAGAGG
(
3
)
1.9
0.0019
Adult retinal
GCTGCTGGTG
(
9
)
11.1
0.0111
Adult retinal
TCTGCTGGTG (
3
)
3.7
0.0037
Adult retinal
ATAGGATACA
(
2
)
1.9
0.0019
Adult retinal
GAGCTCTCTG (
2
)
1.9
0.0019
ONL
GCTGCTGGTG
(
9
)
13.4
0.0134
ONL
AGGGCAGAGG
(
3
)
1.9
0.0019
ONL
ATAGGATACA
(
2
)
1.9
0.0019
ONL
GCCTTAGCAT
(
3
)
1.9
0.0019
