Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.102705
2900054C01Rik
RIKEN cDNA 2900054C01 gene
X
73049
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCAAAAAAAA (
35
)
22.8
0.0228
Cb medulloblastoma
CCAAAAAAAA (
35
)
90.2
0.0902
Cb medulloblastoma
TCCCCTCCTG (
4
)
2.3
0.0023
P8 GC+1d culture
CCAAAAAAAA (
35
)
38.8
0.0388
P8 GC+1d culture
TATACCTGTA
(
2
)
1.1
0.0011
P8 GC+1d culture
TGGGAAGATC
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
CCAAAAAAAA (
35
)
39.8
0.0398
P8 GC+SHH+1d culture
TCTTTAATAA
2.3
0.0023
P8 GC+SHH+1d culture
TATACCTGTA
(
2
)
1.2
0.0012
3T3 fibroblasts
TCCCCTCCTG (
4
)
3.5
0.0035
E15 cortex
CCAAAAAAAA (
35
)
9.9
0.0099
P1 cortex
CCAAAAAAAA (
35
)
40.9
0.0409
P1 cortex
TATACCTGTA
(
2
)
9.1
0.0091
Hypothalamus
CCAAAAAAAA (
35
)
38
0.038
Hypothalamus
TGGGAAGATC
(
6
)
3.6
0.0036
Hypothalamus
TATACCTGTA
(
2
)
1.8
0.0018
Hypothalamus
TCTTTAATAA
1.8
0.0018
E12.5 retina
CCAAAAAAAA (
35
)
16.9
0.0169
E12.5 retina
TCCCCTCCTG (
4
)
1.9
0.0019
E14.5 retina
CCAAAAAAAA (
35
)
18.2
0.0182
E14.5 retina
TCCCCTCCTG (
4
)
3.6
0.0036
E16.5 retina
CCAAAAAAAA (
35
)
16.3
0.0163
E18.5 retina
CCAAAAAAAA (
35
)
38.2
0.0382
E18.5 retina
TCCCCTCCTG (
4
)
1.8
0.0018
P0.5 retina
CCAAAAAAAA (
35
)
29.4
0.0294
P2.5 retina
CCAAAAAAAA (
35
)
44
0.044
P2.5 retina
TCCCCTCCTG (
4
)
7
0.007
P4.5 retina
CCAAAAAAAA (
35
)
39.6
0.0396
P4.5 retina
TCCCCTCCTG (
4
)
5.9
0.0059
P4.5 retina
TCTTTAATAA
2
0.002
P6.5 retina
CCAAAAAAAA (
35
)
38.3
0.0383
P6.5 retina
TCCCCTCCTG (
4
)
6.7
0.0067
P10.5 crx- retina
CCAAAAAAAA (
35
)
14.9
0.0149
P10.5 crx- retina
TCCCCTCCTG (
4
)
1.9
0.0019
P10.5 crx+ retina
CCAAAAAAAA (
35
)
38.4
0.0384
P10.5 crx+ retina
TCCCCTCCTG (
4
)
3.8
0.0038
Adult retinal
CCAAAAAAAA (
35
)
35.2
0.0352
Adult retinal
TCCCCTCCTG (
4
)
1.9
0.0019
ONL
CCAAAAAAAA (
35
)
7.7
0.0077
ONL
TCCCCTCCTG (
4
)
3.8
0.0038
