Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.10288	Atp9a	ATPase, class II, type 9A	2		11981
Gene Ontology	ATP binding | ATPase activity | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | cation transport | hydrolase activity | integral to membrane | magnesium ion binding | membrane
Human Homolog	ATP9A[ATPase, Class II, type 9A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGTTCTGAC (2) 19.6 0.0196 P8 Cb GC TGATAAAAGT (5) 13.1 0.0131 P8 Cb GC AGGTGCCCAG (5) 8.2 0.0082 P8 Cb GC ACAAGAGGTT (2) 1.6 0.0016 P8 Cb GC GTGGATGTCA (4) 1.6 0.0016 P8 Cb GC TGGGAGGGAT (6) 1.6 0.0016 Cb medulloblastoma TTGTTCTGAC (2) 23.1 0.0231 Cb medulloblastoma TGATAAAAGT (5) 16.2 0.0162 Cb medulloblastoma AGGTGCCCAG (5) 2.3 0.0023 Cb medulloblastoma GTGGATGTCA (4) 2.3 0.0023 P8 GC+1d culture TTGTTCTGAC (2) 24 0.024 P8 GC+1d culture TGATAAAAGT (5) 22.8 0.0228 P8 GC+1d culture ACAAGAGGTT (2) 1.1 0.0011 P8 GC+1d culture AGCCACCTCA (4) 1.1 0.0011 P8 GC+1d culture GCTGGCTGCC (4) 1.1 0.0011 P8 GC+1d culture GCTTGGCATT (4) 1.1 0.0011 P8 GC+1d culture GTGGATGTCA (4) 1.1 0.0011 P8 GC+SHH+1d culture TTGTTCTGAC (2) 28.1 0.0281 P8 GC+SHH+1d culture TGATAAAAGT (5) 19.9 0.0199 P8 GC+SHH+1d culture AGGTGCCCAG (5) 2.3 0.0023 P8 GC+SHH+1d culture GCTGGCTGCC (4) 2.3 0.0023 P8 GC+SHH+1d culture ATGAGACCTG 1.2 0.0012 P8 GC+SHH+1d culture GTGGATGTCA (4) 1.2 0.0012 P8 GC+SHH+1d culture TTGCAGCAGA (5) 1.2 0.0012 3T3 fibroblasts AGCCACCTCA (4) 7 0.007 E15 cortex GTGGATGTCA (4) 4.9 0.0049 E15 cortex TTGTTCTGAC (2) 4.9 0.0049 P1 cortex TGATAAAAGT (5) 18.2 0.0182 P1 cortex GTGGATGTCA (4) 9.1 0.0091 P1 cortex GCTGGCTGCC (4) 4.5 0.0045 Hypothalamus TTGTTCTGAC (2) 30.8 0.0308 Hypothalamus TGATAAAAGT (5) 23.5 0.0235 Hypothalamus TTGCAGCAGA (5) 9.1 0.0091 Hypothalamus AGGCTTCGCT 3.6 0.0036 Hypothalamus ACAAGAGGTT (2) 1.8 0.0018 Hypothalamus GTGGATGTCA (4) 1.8 0.0018 E12.5 retina TTGTTCTGAC (2) 24.4 0.0244 E12.5 retina AGCCACCTCA (4) 1.9 0.0019 E12.5 retina GCTGGCTGCC (4) 1.9 0.0019 E12.5 retina GTGGATGTCA (4) 1.9 0.0019 E14.5 retina TTGTTCTGAC (2) 16.4 0.0164 E14.5 retina AGGTGCCCAG (5) 14.6 0.0146 E14.5 retina TGATAAAAGT (5) 3.6 0.0036 E14.5 retina ACAAGAGGTT (2) 1.8 0.0018 E14.5 retina ATGAGACCTG 1.8 0.0018 E16.5 retina TTGTTCTGAC (2) 27.2 0.0272 E16.5 retina AGGTGCCCAG (5) 18.1 0.0181 E16.5 retina TGATAAAAGT (5) 3.6 0.0036 E16.5 retina ACAAGAGGTT (2) 1.8 0.0018 E16.5 retina AGCCACCTCA (4) 1.8 0.0018 E16.5 retina GAACTGGCCT (2) 1.8 0.0018 E16.5 retina GCTGGCTGCC (4) 1.8 0.0018 E16.5 retina TGGAAGAGTG (2) 1.8 0.0018 E16.5 retina TGGGAGGGAT (6) 1.8 0.0018 E18.5 retina TTGTTCTGAC (2) 32.7 0.0327 E18.5 retina AGGTGCCCAG (5) 9.1 0.0091 E18.5 retina TGATAAAAGT (5) 7.3 0.0073 E18.5 retina GCTGGCTGCC (4) 3.6 0.0036 E18.5 retina TGGAAGAGTG (2) 3.6 0.0036 E18.5 retina ACAAGAGGTT (2) 1.8 0.0018 E18.5 retina GTGGATGTCA (4) 1.8 0.0018 P0.5 retina TTGTTCTGAC (2) 7.9 0.0079 P0.5 retina AGGTGCCCAG (5) 5.9 0.0059 P0.5 retina AGCCACCTCA (4) 3.9 0.0039 P0.5 retina GAACTGGCCT (2) 2 0.002 P2.5 retina TTGTTCTGAC (2) 38.7 0.0387 P2.5 retina TGATAAAAGT (5) 19.4 0.0194 P2.5 retina AGGTGCCCAG (5) 7 0.007 P4.5 retina TTGTTCTGAC (2) 45.6 0.0456 P4.5 retina TGATAAAAGT (5) 23.8 0.0238 P4.5 retina GTGGATGTCA (4) 2 0.002 P4.5 retina TGGAAGAGTG (2) 2 0.002 P6.5 retina TTGTTCTGAC (2) 33.3 0.0333 P6.5 retina TGATAAAAGT (5) 18.3 0.0183 P6.5 retina AGCCACCTCA (4) 3.3 0.0033 P6.5 retina ACAAGAGGTT (2) 1.7 0.0017 P6.5 retina AGGCTTCGCT 1.7 0.0017 P6.5 retina GAACTGGCCT (2) 1.7 0.0017 P6.5 retina GCTTGGCATT (4) 1.7 0.0017 P6.5 retina TGGGAGGGAT (6) 1.7 0.0017 P6.5 retina TTGCAGCAGA (5) 1.7 0.0017 P10.5 crx- retina TTGTTCTGAC (2) 29.7 0.0297 P10.5 crx- retina TGATAAAAGT (5) 5.6 0.0056 P10.5 crx- retina AGCCACCTCA (4) 3.7 0.0037 P10.5 crx+ retina TTGTTCTGAC (2) 46.1 0.0461 P10.5 crx+ retina TGATAAAAGT (5) 17.3 0.0173 P10.5 crx+ retina ATGAGACCTG 1.9 0.0019 P10.5 crx+ retina GCTTGGCATT (4) 1.9 0.0019 Adult retinal TTGTTCTGAC (2) 37 0.037 Adult retinal TGATAAAAGT (5) 9.3 0.0093 Adult retinal GCTGGCTGCC (4) 1.9 0.0019 Adult retinal GCTTGGCATT (4) 1.9 0.0019 ONL TTGTTCTGAC (2) 13.4 0.0134