Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.10331	Tnfaip1	tumor necrosis factor, alpha-induced protein 1 (endothelial)	11	11 45.1 cM	21927
Gene Ontology	membrane | potassium ion transport | protein binding | voltage-gated potassium channel activity | voltage-gated potassium channel complex
Human Homolog	TNFAIP1[tumor necrosis factor, alpha-induced protein 1 (endothelial)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTATGTTT (3) 179.4 0.1794 P8 Cb GC AAAAAAGAAA (12) 3.3 0.0033 P8 Cb GC TTCTAGGCTA 3.3 0.0033 P8 Cb GC GAGGGTAAAG (7) 1.6 0.0016 P8 Cb GC GGCTGAGGAA (3) 1.6 0.0016 P8 Cb GC TGACTGGTTG 1.6 0.0016 P8 Cb GC TTTAATGTTT (5) 1.6 0.0016 Cb medulloblastoma TTTTATGTTT (3) 30.1 0.0301 Cb medulloblastoma AAAAAAGAAA (12) 6.9 0.0069 Cb medulloblastoma GAGGGTAAAG (7) 2.3 0.0023 Cb medulloblastoma TGACTGGTTG 2.3 0.0023 P8 GC+1d culture TTTTATGTTT (3) 161 0.161 P8 GC+1d culture TGACTGGTTG 3.4 0.0034 P8 GC+1d culture AAAAAAGAAA (12) 2.3 0.0023 P8 GC+1d culture TTCTAGGCTA 1.1 0.0011 P8 GC+SHH+1d culture TTTTATGTTT (3) 149.9 0.1499 P8 GC+SHH+1d culture TGACTGGTTG 4.7 0.0047 P8 GC+SHH+1d culture AAAAAAGAAA (12) 2.3 0.0023 P8 GC+SHH+1d culture TATGTTTTTT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTCCAGTGA (5) 1.2 0.0012 3T3 fibroblasts TTTTATGTTT (3) 45.6 0.0456 3T3 fibroblasts TGACTGGTTG 10.5 0.0105 E15 cortex TATGTTTTTT (4) 4.9 0.0049 E15 cortex TTCTAGGCTA 4.9 0.0049 E15 cortex TTTCCAGTGA (5) 4.9 0.0049 E15 cortex TTTTATGTTT (3) 4.9 0.0049 P1 cortex TTTTATGTTT (3) 95.5 0.0955 P1 cortex TTCTAGGCTA 4.5 0.0045 Hypothalamus TTTTATGTTT (3) 65.2 0.0652 E12.5 retina TTTTATGTTT (3) 215.9 0.2159 E12.5 retina TATGTTTTTT (4) 1.9 0.0019 E12.5 retina TCTTATGTTT (2) 1.9 0.0019 E14.5 retina TTTTATGTTT (3) 382.6 0.3826 E14.5 retina GGCTGAGGAA (3) 1.8 0.0018 E14.5 retina TTTCCAGTGA (5) 1.8 0.0018 E16.5 retina TTTTATGTTT (3) 490.8 0.4908 E16.5 retina TTTCCAGTGA (5) 5.4 0.0054 E16.5 retina GAGGGTAAAG (7) 1.8 0.0018 E16.5 retina GGCTGAGGAA (3) 1.8 0.0018 E16.5 retina TATGTTTTTT (4) 1.8 0.0018 E16.5 retina TGACTGGTTG 1.8 0.0018 E18.5 retina TTTTATGTTT (3) 247.4 0.2474 P0.5 retina TTTTATGTTT (3) 98.1 0.0981 P0.5 retina TGACTGGTTG 2 0.002 P2.5 retina TTTTATGTTT (3) 158.4 0.1584 P2.5 retina TATGTTTTTT (4) 5.3 0.0053 P2.5 retina AAAAAAGAAA (12) 3.5 0.0035 P2.5 retina GAGGGTAAAG (7) 1.8 0.0018 P2.5 retina TCTTATGTTT (2) 1.8 0.0018 P2.5 retina TGACTGGTTG 1.8 0.0018 P4.5 retina TTTTATGTTT (3) 89.2 0.0892 P4.5 retina TATGTTTTTT (4) 9.9 0.0099 P4.5 retina TGACTGGTTG 4 0.004 P4.5 retina AAAAAAGAAA (12) 2 0.002 P6.5 retina TTTTATGTTT (3) 88.4 0.0884 P6.5 retina TGACTGGTTG 3.3 0.0033 P6.5 retina AAAAAAGAAA (12) 1.7 0.0017 P6.5 retina TTTCCAGTGA (5) 1.7 0.0017 P10.5 crx- retina TTTTATGTTT (3) 243.4 0.2434 P10.5 crx- retina AAAAAAGAAA (12) 1.9 0.0019 P10.5 crx- retina GAGGGTAAAG (7) 1.9 0.0019 P10.5 crx- retina TATGTTTTTT (4) 1.9 0.0019 P10.5 crx- retina TGACTGGTTG 1.9 0.0019 P10.5 crx- retina TTTCCAGTGA (5) 1.9 0.0019 P10.5 crx+ retina TTTTATGTTT (3) 44.2 0.0442 P10.5 crx+ retina GGCTGAGGAA (3) 1.9 0.0019 P10.5 crx+ retina TATGTTTTTT (4) 1.9 0.0019 P10.5 crx+ retina TCTTATGTTT (2) 1.9 0.0019 P10.5 crx+ retina TGACTGGTTG 1.9 0.0019 P10.5 crx+ retina TTCTAGGCTA 1.9 0.0019 Adult retinal TTTTATGTTT (3) 7.4 0.0074 Adult retinal TGACTGGTTG 5.6 0.0056 Adult retinal TATGTTTTTT (4) 1.9 0.0019 ONL TTTTATGTTT (3) 47.9 0.0479 ONL TTTAATGTTT (5) 9.6 0.0096 ONL AAAAAAGAAA (12) 3.8 0.0038 ONL TGACTGGTTG 1.9 0.0019