Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.103382	Ppfibp1	PTPRF interacting protein, binding protein 1 (liprin beta 1)	6		67533
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	PPFIBP1[PTPRF interacting protein, binding protein 1 (liprin beta 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAGCAGCAC (5) 1.6 0.0016 P8 Cb GC GCAGATGGAA 1.6 0.0016 Cb medulloblastoma GCAGATGGAA 9.2 0.0092 P8 GC+1d culture AATAAATACC (7) 2.3 0.0023 P8 GC+1d culture TTTTCTGTCA (2) 2.3 0.0023 P8 GC+1d culture AGACTCTTTG (2) 1.1 0.0011 P8 GC+1d culture GCAGATGGAA 1.1 0.0011 P8 GC+SHH+1d culture AATAAATACC (7) 5.9 0.0059 P8 GC+SHH+1d culture TTTTCTGTCA (2) 2.3 0.0023 P8 GC+SHH+1d culture GCAGATGGAA 1.2 0.0012 3T3 fibroblasts CCAGCAGCAC (5) 38.6 0.0386 3T3 fibroblasts AGACTCTTTG (2) 3.5 0.0035 Hypothalamus AATAAATACC (7) 3.6 0.0036 E12.5 retina AATAAATACC (7) 1.9 0.0019 E14.5 retina AATAAATACC (7) 3.6 0.0036 E14.5 retina AGACTCTTTG (2) 1.8 0.0018 E16.5 retina AATAAATACC (7) 1.8 0.0018 E16.5 retina GCAGATGGAA 1.8 0.0018 E18.5 retina GAGGAAAACA (5) 3.6 0.0036 E18.5 retina GCAGATGGAA 1.8 0.0018 P2.5 retina AATAAATACC (7) 1.8 0.0018 P6.5 retina AATAAATACC (7) 3.3 0.0033 P10.5 crx- retina AATAAATACC (7) 5.6 0.0056 P10.5 crx- retina AGACTCTTTG (2) 3.7 0.0037 P10.5 crx+ retina AATAAATACC (7) 1.9 0.0019 P10.5 crx+ retina AGACTCTTTG (2) 1.9 0.0019 Adult retinal AATAAATACC (7) 1.9 0.0019 ONL AATAAATACC (7) 3.8 0.0038 ONL AGACTCTTTG (2) 3.8 0.0038 ONL GAGGAAAACA (5) 1.9 0.0019