Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.103413
0610009K11Rik
RIKEN cDNA 0610009K11 gene
4
68350
Gene Ontology
integral to membrane
Human Homolog
FLJ12875[hypothetical protein FLJ12875]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 70 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
GAAACAAGGG (
9
)
3.3
0.0033
P8 Cb GC
AATGCACACA (
7
)
1.6
0.0016
P8 Cb GC
GGAAAAAAAG (
8
)
1.6
0.0016
P8 Cb GC
TGTATGACTG
(
2
)
1.6
0.0016
P8 Cb GC
TGTGTTCCTG (
4
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TGTGTTGCTA (
2
)
6.9
0.0069
Cb medulloblastoma
GAGACTGATC
4.6
0.0046
Cb medulloblastoma
TGTATGACTG
(
2
)
4.6
0.0046
Cb medulloblastoma
GATCTAGCTC
(
2
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
GAAACAAGGG (
9
)
2.3
0.0023
P8 GC+1d culture
TGTATGACTG
(
2
)
2.3
0.0023
P8 GC+1d culture
AATGCACACA (
7
)
1.1
0.0011
P8 GC+1d culture
GAGACTGATC
1.1
0.0011
P8 GC+1d culture
GATCTAGCTC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
AATGCACACA (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGACTGATC
1.2
0.0012
P8 GC+SHH+1d culture
TGTGTTGCTA (
2
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GTGGGAGGCC (
2
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GTGGTGGTGT (
7
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TGTGTTGCTA (
2
)
9.1
0.0091
Hypothalamus
GTGGTGGTGT (
7
)
3.6
0.0036
Hypothalamus
TGTATGACTG
(
2
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GAAACAAGGG (
9
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TGTGTTCCTG (
4
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GAGACTGATC
3.6
0.0036
E16.5 retina
GTGGGAGGCC (
2
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
AATGCACACA (
7
)
1.8
0.0018
E18.5 retina
GTGGTGGTGT (
7
)
1.8
0.0018
E18.5 retina
TGTGTTCCTG (
4
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
GAGACTGATC
3.9
0.0039
P0.5 retina
AATGCACACA (
7
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GGAAAAAAAG (
8
)
5.3
0.0053
P2.5 retina
GAGACTGATC
1.8
0.0018
P2.5 retina
GTGGTGGTGT (
7
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
AATGCACACA (
7
)
1.7
0.0017
P6.5 retina
GATCTAGCTC
(
2
)
1.7
0.0017
P6.5 retina
GTGGGAGGCC (
2
)
1.7
0.0017
P6.5 retina
TGTATGACTG
(
2
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GAGGCCCCAA (
4
)
5.6
0.0056
P10.5 crx- retina
GAAACAAGGG (
9
)
1.9
0.0019
P10.5 crx- retina
GAGACTGATC
1.9
0.0019
P10.5 crx- retina
GTGGTGGTGT (
7
)
1.9
0.0019
P10.5 crx- retina
TGTGTTGCTA (
2
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
AATGCACACA (
7
)
1.9
0.0019
P10.5 crx+ retina
GAGACTGATC
1.9
0.0019
P10.5 crx+ retina
GAGGCCCCAA (
4
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
TGTATGACTG
(
2
)
1.9
0.0019
Adult retinal
TGTGTTCCTG (
4
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
AATGCACACA (
7
)
7.7
0.0077
ONL
TGTATGACTG
(
2
)
1.9
0.0019
