Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.103427
4933411D12Rik
RIKEN cDNA 4933411D12 gene
8
74086
Mm.103427
A730042J05Rik
RIKEN cDNA A730042J05 gene
8
8 A1.1
234069
Human Homolog
FLJ11305[hypothetical protein FLJ11305]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
GCGGCGTCCG (
4
)
4.6
0.0046
Cb medulloblastoma
GGAGAGGGGT
(
3
)
2.3
0.0023
P8 GC+1d culture
TTTGACAGTG (
4
)
3.4
0.0034
P8 GC+1d culture
GCGGCGTCCG (
4
)
2.3
0.0023
P8 GC+1d culture
CATACATAAA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTGACAGTG (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
CATACATAAA
(
3
)
1.2
0.0012
3T3 fibroblasts
GCGGCGTCCG (
4
)
17.5
0.0175
P1 cortex
TTTGACAGTG (
4
)
9.1
0.0091
P1 cortex
GGAGAGGGGT
(
3
)
4.5
0.0045
Hypothalamus
GAGACCTTGA (
5
)
1.8
0.0018
Hypothalamus
TTTGACAGTG (
4
)
1.8
0.0018
E12.5 retina
CATACATAAA
(
3
)
3.8
0.0038
E12.5 retina
GAGACCTTGA (
5
)
1.9
0.0019
E12.5 retina
TTTGACAGTG (
4
)
1.9
0.0019
E14.5 retina
CATACATAAA
(
3
)
1.8
0.0018
E14.5 retina
GAGACCTTGA (
5
)
1.8
0.0018
E14.5 retina
TTTGACAGTG (
4
)
1.8
0.0018
E16.5 retina
GAGACCTTGA (
5
)
3.6
0.0036
E16.5 retina
TTTGACAGTG (
4
)
1.8
0.0018
P0.5 retina
GCGGCGTCCG (
4
)
5.9
0.0059
P0.5 retina
TTTGACAGTG (
4
)
5.9
0.0059
P4.5 retina
CATACATAAA
(
3
)
4
0.004
P4.5 retina
GAGACCTTGA (
5
)
4
0.004
P4.5 retina
GCGGCGTCCG (
4
)
2
0.002
P6.5 retina
GCGGCGTCCG (
4
)
3.3
0.0033
P6.5 retina
GAGACCTTGA (
5
)
1.7
0.0017
P6.5 retina
TTTGACAGTG (
4
)
1.7
0.0017
P10.5 crx- retina
GCGGCGTCCG (
4
)
1.9
0.0019
P10.5 crx- retina
TTTGACAGTG (
4
)
1.9
0.0019
P10.5 crx+ retina
TTTGACAGTG (
4
)
3.8
0.0038
P10.5 crx+ retina
GCGGCGTCCG (
4
)
1.9
0.0019
Adult retinal
GGAGTGGGGT (
5
)
9.3
0.0093
Adult retinal
GAGACCTTGA (
5
)
1.9
0.0019
Adult retinal
GCGGCGTCCG (
4
)
1.9
0.0019
Adult retinal
GGAGAGGGGT
(
3
)
1.9
0.0019
Adult retinal
TTTGACAGTG (
4
)
1.9
0.0019
ONL
TTTGACAGTG (
4
)
3.8
0.0038
