Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.103568	Slc38a1	solute carrier family 38, member 1	15		105727
Gene Ontology	amino acid transport | amino acid-polyamine transporter activity | axon | integral to membrane | L-glutamine transport | L-glutamine transporter activity | membrane | membrane fraction | plasma membrane
Human Homolog	SLC38A1[solute carrier family 38, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGCACACCA 11.4 0.0114 P8 Cb GC TGGAGCGATT 1.6 0.0016 Cb medulloblastoma TAGCACACCA 16.2 0.0162 Cb medulloblastoma ATTGGCAGAA (4) 9.2 0.0092 Cb medulloblastoma TCACAAGAAA (2) 2.3 0.0023 Cb medulloblastoma TCTTGGTGAC (3) 2.3 0.0023 Cb medulloblastoma TTCTCAGATA (4) 2.3 0.0023 P8 GC+1d culture TAGCACACCA 6.8 0.0068 P8 GC+1d culture TTCTCCTTCA (6) 4.6 0.0046 P8 GC+1d culture AAGGATATCT (3) 1.1 0.0011 P8 GC+1d culture TCTGCCTTTT (5) 1.1 0.0011 P8 GC+1d culture TCTTGGTGAC (3) 1.1 0.0011 P8 GC+1d culture TGGAGCGATT 1.1 0.0011 P8 GC+SHH+1d culture TTCTCCTTCA (6) 8.2 0.0082 P8 GC+SHH+1d culture TAGCACACCA 5.9 0.0059 P8 GC+SHH+1d culture TCTTGGTGAC (3) 5.9 0.0059 P8 GC+SHH+1d culture AAGGATATCT (3) 1.2 0.0012 P8 GC+SHH+1d culture CTGCTGCCTT (5) 1.2 0.0012 P8 GC+SHH+1d culture GTGTCCTCTG (4) 1.2 0.0012 P8 GC+SHH+1d culture TCACAAGAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGAGCGATT 1.2 0.0012 P1 cortex AAGGATATCT (3) 13.6 0.0136 P1 cortex CTGCTGCCTT (5) 4.5 0.0045 Hypothalamus ATTGGCAGAA (4) 5.4 0.0054 Hypothalamus AAGGATATCT (3) 1.8 0.0018 Hypothalamus CTGCTGCCTT (5) 1.8 0.0018 Hypothalamus GTGTCCTCTG (4) 1.8 0.0018 Hypothalamus TAGCACACCA 1.8 0.0018 Hypothalamus TTCTCCTTCA (6) 1.8 0.0018 E12.5 retina TCACAAGAAA (2) 1.9 0.0019 E12.5 retina TCTGCCTTTT (5) 1.9 0.0019 E12.5 retina TGGAGCGATT 1.9 0.0019 E14.5 retina TCTGCCTTTT (5) 3.6 0.0036 E14.5 retina AAGGATATCT (3) 1.8 0.0018 E14.5 retina CTGCTGCCTT (5) 1.8 0.0018 E14.5 retina TCTTGGTGAC (3) 1.8 0.0018 E16.5 retina CTGCTGCCTT (5) 3.6 0.0036 E16.5 retina TACTGAGTCA 1.8 0.0018 E16.5 retina TAGCACACCA 1.8 0.0018 E16.5 retina TCACAAGAAA (2) 1.8 0.0018 E16.5 retina TCTTGGTGAC (3) 1.8 0.0018 E16.5 retina TGGAGCGATT 1.8 0.0018 E18.5 retina TAGCACACCA 1.8 0.0018 E18.5 retina TGGAGCGATT 1.8 0.0018 E18.5 retina TTCTCAGATA (4) 1.8 0.0018 P0.5 retina TCTTGGTGAC (3) 5.9 0.0059 P0.5 retina TGGAGCGATT 3.9 0.0039 P0.5 retina TTCTCCTTCA (6) 3.9 0.0039 P0.5 retina TACTGAGTCA 2 0.002 P0.5 retina TCTGCCTTTT (5) 2 0.002 P2.5 retina TAGCACACCA 3.5 0.0035 P2.5 retina TCTTGGTGAC (3) 3.5 0.0035 P2.5 retina AAGGATATCT (3) 1.8 0.0018 P4.5 retina TAGCACACCA 9.9 0.0099 P4.5 retina TCTTGGTGAC (3) 7.9 0.0079 P4.5 retina TACTGAGTCA 4 0.004 P4.5 retina TTCTCCTTCA (6) 4 0.004 P4.5 retina TGACCAGGCA (2) 2 0.002 P4.5 retina TGGAGCGATT 2 0.002 P6.5 retina TCTTGGTGAC (3) 6.7 0.0067 P6.5 retina TAGCACACCA 5 0.005 P6.5 retina GTGTCCTCTG (4) 3.3 0.0033 P6.5 retina TTCTCCTTCA (6) 3.3 0.0033 P6.5 retina TCACAAGAAA (2) 1.7 0.0017 P10.5 crx- retina TCTTGGTGAC (3) 5.6 0.0056 P10.5 crx- retina TAGCACACCA 3.7 0.0037 P10.5 crx- retina CTGCTGCCTT (5) 1.9 0.0019 P10.5 crx+ retina TCTTGGTGAC (3) 11.5 0.0115 P10.5 crx+ retina TAGCACACCA 3.8 0.0038 P10.5 crx+ retina AAGGATATCT (3) 1.9 0.0019 P10.5 crx+ retina TTCTCCTTCA (6) 1.9 0.0019 Adult retinal TCTTGGTGAC (3) 22.2 0.0222 Adult retinal TAGCACACCA 9.3 0.0093 Adult retinal TTCTCCTTCA (6) 5.6 0.0056 Adult retinal GTGTCCTCTG (4) 1.9 0.0019 Adult retinal TACTGAGTCA 1.9 0.0019 Adult retinal TTCTCAGATA (4) 1.9 0.0019 ONL TCTTGGTGAC (3) 19.2 0.0192 ONL GTGTCCTCTG (4) 3.8 0.0038 ONL TGACCAGGCA (2) 3.8 0.0038