Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.10406	Sdhd	succinate dehydrogenase complex, subunit D, integral membrane protein	9		66925
Gene Ontology	electron transport | extracellular space | heme binding | integral to membrane | mitochondrial membrane | mitochondrion | tricarboxylic acid cycle
Human Homolog	SDHD[succinate dehydrogenase complex, subunit D, integral membrane protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTCGAAA 3.3 0.0033 P8 Cb GC GGTTATTTTT (3) 3.3 0.0033 P8 Cb GC TTGCCTTGAG (3) 3.3 0.0033 P8 Cb GC TTGCCTTTTG (4) 3.3 0.0033 Cb medulloblastoma AAGCTGGAAA (4) 4.6 0.0046 Cb medulloblastoma GGTTATTTTT (3) 2.3 0.0023 Cb medulloblastoma TTGCCTTGAG (3) 2.3 0.0023 P8 GC+1d culture GGTTATTTTT (3) 5.7 0.0057 P8 GC+1d culture AAGCTCGAAA 3.4 0.0034 P8 GC+1d culture TTGCCTTGAG (3) 3.4 0.0034 P8 GC+1d culture GAGATGCTCT (4) 1.1 0.0011 P8 GC+SHH+1d culture AAGCTCGAAA 5.9 0.0059 P8 GC+SHH+1d culture GGTTATTTTT (3) 4.7 0.0047 P8 GC+SHH+1d culture CAAAGTCTAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGGTTCTCT (3) 1.2 0.0012 3T3 fibroblasts AAGCTCGAAA 7 0.007 3T3 fibroblasts GGGGTTCTCT (3) 3.5 0.0035 3T3 fibroblasts GGTTATTTTT (3) 3.5 0.0035 E15 cortex ATATTGCCAG (2) 9.9 0.0099 E15 cortex GGTTATTTTT (3) 9.9 0.0099 E15 cortex AAGGCTCAAA (3) 4.9 0.0049 E15 cortex TTGCCTTTTG (4) 4.9 0.0049 P1 cortex AAGCTCGAAA 18.2 0.0182 P1 cortex ATATTGCCAG (2) 9.1 0.0091 P1 cortex GGTTATTTTT (3) 4.5 0.0045 Hypothalamus AAGCTCGAAA 3.6 0.0036 Hypothalamus AAGCTGGAAA (4) 1.8 0.0018 Hypothalamus CAAAGTCTAA (2) 1.8 0.0018 Hypothalamus GGTTATTTTT (3) 1.8 0.0018 Hypothalamus TTGCCTTTTG (4) 1.8 0.0018 E12.5 retina GGTTATTTTT (3) 5.6 0.0056 E12.5 retina AAGCTCGAAA 1.9 0.0019 E14.5 retina GGTTATTTTT (3) 3.6 0.0036 E16.5 retina GGGGTTCTCT (3) 5.4 0.0054 E16.5 retina GGTTATTTTT (3) 1.8 0.0018 E16.5 retina TTGCCTTTTG (4) 1.8 0.0018 E18.5 retina GGTTATTTTT (3) 9.1 0.0091 E18.5 retina AAGCTCGAAA 1.8 0.0018 E18.5 retina CAAAGTCTAA (2) 1.8 0.0018 P0.5 retina AAGCTCGAAA 7.9 0.0079 P0.5 retina GGTTATTTTT (3) 5.9 0.0059 P0.5 retina GGGGTTCTCT (3) 2 0.002 P2.5 retina GGTTATTTTT (3) 7 0.007 P2.5 retina AAGGCTCAAA (3) 1.8 0.0018 P4.5 retina GGTTATTTTT (3) 5.9 0.0059 P4.5 retina CAAAGTCTAA (2) 2 0.002 P4.5 retina TTGCCTTGAG (3) 2 0.002 P6.5 retina GGTTATTTTT (3) 6.7 0.0067 P6.5 retina AAGGCTCAAA (3) 1.7 0.0017 P6.5 retina ATATTGCCAG (2) 1.7 0.0017 P6.5 retina TTGCCTTGAG (3) 1.7 0.0017 P10.5 crx- retina AAGCTGGAAA (4) 20.4 0.0204 P10.5 crx+ retina GAGATGCTCT (4) 3.8 0.0038 P10.5 crx+ retina AAGCTGGAAA (4) 1.9 0.0019 P10.5 crx+ retina GGTTATTTTT (3) 1.9 0.0019 Adult retinal AAGCTCGAAA 5.6 0.0056 Adult retinal GGTTATTTTT (3) 1.9 0.0019 Adult retinal TTGCCTTTTG (4) 1.9 0.0019 ONL AAGCTCGAAA 1.9 0.0019 ONL AAGGCTCAAA (3) 1.9 0.0019