Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.104491	Selk	selenoprotein K	14		80795
Gene Ontology	integral to membrane
Human Homolog	SELK[selenoprotein K]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATTTAGTCC (2) 11.4 0.0114 P8 Cb GC TTTGTCTCCT 4.9 0.0049 P8 Cb GC GCCTTTATTT (3) 3.3 0.0033 P8 Cb GC GAGAGTGTCT 1.6 0.0016 P8 Cb GC TAAATTTGCT (2) 1.6 0.0016 P8 Cb GC TGTGTCTCCT (3) 1.6 0.0016 Cb medulloblastoma TATTTAGTCC (2) 11.6 0.0116 Cb medulloblastoma TAAATTTGCT (2) 4.6 0.0046 Cb medulloblastoma TATTTAAAAA (8) 4.6 0.0046 Cb medulloblastoma TATTTTAAAA (10) 4.6 0.0046 Cb medulloblastoma GGCTTTATTT (3) 2.3 0.0023 Cb medulloblastoma TTTGTCTCCT 2.3 0.0023 P8 GC+1d culture TATTTAGTCC (2) 20.5 0.0205 P8 GC+1d culture TAAATTTGCT (2) 9.1 0.0091 P8 GC+1d culture TTTGTCTCCT 3.4 0.0034 P8 GC+1d culture ACCTCATTCA (3) 1.1 0.0011 P8 GC+1d culture TGTGTCTCCT (3) 1.1 0.0011 P8 GC+SHH+1d culture TATTTAGTCC (2) 19.9 0.0199 P8 GC+SHH+1d culture TTTGTCTCCT 4.7 0.0047 P8 GC+SHH+1d culture GCCTTTATTT (3) 3.5 0.0035 P8 GC+SHH+1d culture TAAATTTGCT (2) 2.3 0.0023 P8 GC+SHH+1d culture GAGAGTGTCT 1.2 0.0012 P8 GC+SHH+1d culture TATTTAAAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture TATTTTAAAA (10) 1.2 0.0012 P8 GC+SHH+1d culture TGTGTCTCCT (3) 1.2 0.0012 E15 cortex TATTTAGTCC (2) 4.9 0.0049 P1 cortex GCCTTTATTT (3) 4.5 0.0045 P1 cortex TATTTTAAAA (10) 4.5 0.0045 Hypothalamus TATTTAGTCC (2) 10.9 0.0109 Hypothalamus GTTGGCCCCC (2) 7.2 0.0072 Hypothalamus GGCTTTATTT (3) 3.6 0.0036 Hypothalamus GGGACTGATT (3) 3.6 0.0036 Hypothalamus TAAATTTGCT (2) 3.6 0.0036 Hypothalamus GCCTTTATTT (3) 1.8 0.0018 Hypothalamus TATTTTAAAA (10) 1.8 0.0018 E12.5 retina TATTTAGTCC (2) 9.4 0.0094 E12.5 retina TGTGTCTCCT (3) 3.8 0.0038 E12.5 retina GAGAGTGTCT 1.9 0.0019 E14.5 retina TATTTAGTCC (2) 9.1 0.0091 E14.5 retina TAAATTTGCT (2) 7.3 0.0073 E14.5 retina GCCTTTATTT (3) 1.8 0.0018 E14.5 retina TATTTTAAAA (10) 1.8 0.0018 E16.5 retina TATTTAGTCC (2) 16.3 0.0163 E16.5 retina GGCTTTATTT (3) 5.4 0.0054 E16.5 retina TATTTTAAAA (10) 3.6 0.0036 E16.5 retina GCAATCAAGG (2) 1.8 0.0018 E16.5 retina GCCTTTATTT (3) 1.8 0.0018 E16.5 retina GGGACTGATT (3) 1.8 0.0018 E16.5 retina TGTGTCTCCT (3) 1.8 0.0018 E18.5 retina TATTTAGTCC (2) 25.5 0.0255 E18.5 retina TAAATTTGCT (2) 3.6 0.0036 E18.5 retina TATTTAAAAA (8) 3.6 0.0036 E18.5 retina GCCTTTATTT (3) 1.8 0.0018 E18.5 retina TTTGTCTCCT 1.8 0.0018 P0.5 retina TATTTAGTCC (2) 7.9 0.0079 P0.5 retina TAAATTTGCT (2) 3.9 0.0039 P0.5 retina GCCTTTATTT (3) 2 0.002 P0.5 retina TGTGTCTCCT (3) 2 0.002 P2.5 retina TATTTAAAAA (8) 5.3 0.0053 P2.5 retina TTTGTCTCCT 5.3 0.0053 P2.5 retina TATTTAGTCC (2) 3.5 0.0035 P2.5 retina TAAATTTGCT (2) 1.8 0.0018 P4.5 retina TATTTAGTCC (2) 19.8 0.0198 P4.5 retina GGCTTTATTT (3) 4 0.004 P4.5 retina TATTTTAAAA (10) 2 0.002 P4.5 retina TGTGTCTCCT (3) 2 0.002 P6.5 retina TATTTAGTCC (2) 18.3 0.0183 P6.5 retina TGTGTCTCCT (3) 10 0.01 P6.5 retina GCCTTTATTT (3) 3.3 0.0033 P6.5 retina TATTTTAAAA (10) 3.3 0.0033 P6.5 retina TATTTAAAAA (8) 1.7 0.0017 P6.5 retina TTTGTCTCCT 1.7 0.0017 P10.5 crx- retina TATTTAGTCC (2) 5.6 0.0056 P10.5 crx- retina GGCTTTATTT (3) 1.9 0.0019 P10.5 crx- retina TATTTAAAAA (8) 1.9 0.0019 P10.5 crx- retina TGTGTCTCCT (3) 1.9 0.0019 P10.5 crx+ retina TATTTAGTCC (2) 7.7 0.0077 P10.5 crx+ retina TTTGTCTCCT 3.8 0.0038 P10.5 crx+ retina ACCTCATTCA (3) 1.9 0.0019 P10.5 crx+ retina GCCTTTATTT (3) 1.9 0.0019 Adult retinal TATTTAGTCC (2) 11.1 0.0111 Adult retinal GCAATCAAGG (2) 3.7 0.0037 Adult retinal TGTGTCTCCT (3) 3.7 0.0037 Adult retinal TATTTAAAAA (8) 1.9 0.0019 ONL TATTTAGTCC (2) 5.7 0.0057 ONL GCCTTTATTT (3) 3.8 0.0038 ONL TAAATTTGCT (2) 1.9 0.0019 ONL TTTGTCTCCT 1.9 0.0019