Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.104540	Napa	N-ethylmaleimide sensitive fusion protein attachment protein alpha	7	7 15.2 cM	108124
Gene Ontology	apical protein localization | brain development | endoplasmic reticulum | Golgi apparatus | intracellular protein transport | intracellular transporter activity | neuron differentiation | protein transport | syntaxin binding | transport
Human Homolog	NAPA[N-ethylmaleimide-sensitive factor attachment protein, alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCAAAAAAAA (35) 22.8 0.0228 P8 Cb GC AAGGAACAGA (3) 1.6 0.0016 P8 Cb GC AGGAACAGGA (4) 1.6 0.0016 P8 Cb GC CATCCAGGTC 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCAAAAAAAA (35) 90.2 0.0902 Cb medulloblastoma CATCCAGGTC 4.6 0.0046 Cb medulloblastoma GGTGCTGAAT (3) 4.6 0.0046 Cb medulloblastoma AGGAACAGGA (4) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CCAAAAAAAA (35) 38.8 0.0388 P8 GC+1d culture AGGAACAGGA (4) 13.7 0.0137 P8 GC+1d culture GGTGCTGAAT (3) 5.7 0.0057 P8 GC+1d culture CATCCAGGTC 1.1 0.0011 P8 GC+1d culture TCTCTGGTCA (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CCAAAAAAAA (35) 39.8 0.0398 P8 GC+SHH+1d culture AGGAACAGGA (4) 4.7 0.0047 P8 GC+SHH+1d culture CATCCAGGTC 4.7 0.0047 P8 GC+SHH+1d culture GGTGCTGAAT (3) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts AGGAACAGGA (4) 17.5 0.0175 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex AGGAACAGGA (4) 19.8 0.0198 E15 cortex CCAAAAAAAA (35) 9.9 0.0099 E15 cortex AGCTCCAGGG (7) 4.9 0.0049 E15 cortex CATCCAGGTC 4.9 0.0049 E15 cortex GGTGCTGAAT (3) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCAAAAAAAA (35) 40.9 0.0409 P1 cortex GGTGCTGAAT (3) 9.1 0.0091 P1 cortex AGGAACAGGA (4) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CCAAAAAAAA (35) 38 0.038 Hypothalamus AGGAACAGAA (6) 3.6 0.0036 Hypothalamus AGGAACAGGA (4) 3.6 0.0036 Hypothalamus CATCCAGGTC 3.6 0.0036 Hypothalamus GGGGTGGGGC (4) 1.8 0.0018 Hypothalamus GGTGCTGAAT (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCAAAAAAAA (35) 16.9 0.0169 E12.5 retina AGGAACAGGA (4) 7.5 0.0075 E12.5 retina GGTGCTGAAT (3) 5.6 0.0056 E12.5 retina AGGAACAGAA (6) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina CCAAAAAAAA (35) 18.2 0.0182 E14.5 retina AGCTCCAGGG (7) 3.6 0.0036 E14.5 retina CATCCAGGTC 3.6 0.0036 E14.5 retina GGTGCTGAAT (3) 3.6 0.0036 E14.5 retina AGGAACAGGA (4) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CCAAAAAAAA (35) 16.3 0.0163 E16.5 retina AGGAACAGGA (4) 7.2 0.0072 E16.5 retina CATCCAGGTC 5.4 0.0054 E16.5 retina AGCTCCAGGG (7) 1.8 0.0018 E16.5 retina GGTGCTGAAT (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CCAAAAAAAA (35) 38.2 0.0382 E18.5 retina GGTGCTGAAT (3) 7.3 0.0073 E18.5 retina AGGAACAGGA (4) 3.6 0.0036 E18.5 retina CATCCAGGTC 1.8 0.0018 E18.5 retina GATCAGGTAA (3) 1.8 0.0018 E18.5 retina TCTCTGGTCA (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCAAAAAAAA (35) 29.4 0.0294 P0.5 retina GGTGCTGAAT (3) 5.9 0.0059 P0.5 retina AGGAACAGGA (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CCAAAAAAAA (35) 44 0.044 P2.5 retina AGGAACAGGA (4) 7 0.007 P2.5 retina GGGGTGGGGC (4) 3.5 0.0035 P2.5 retina GGTGCTGAAT (3) 3.5 0.0035 P2.5 retina CATCCAGGTC 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CCAAAAAAAA (35) 39.6 0.0396 P4.5 retina GGTGCTGAAT (3) 5.9 0.0059 P4.5 retina CATCCAGGTC 4 0.004 P4.5 retina AAGGAACAGA (3) 2 0.002 P4.5 retina AGGAACAGGA (4) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CCAAAAAAAA (35) 38.3 0.0383 P6.5 retina AGGAACAGGA (4) 11.7 0.0117 P6.5 retina CATCCAGGTC 6.7 0.0067 P6.5 retina AGCTCCAGGG (7) 1.7 0.0017 P6.5 retina GATCAGGTAA (3) 1.7 0.0017 P6.5 retina GGTGCTGAAT (3) 1.7 0.0017 P6.5 retina TCTCTGGTCA (2) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CCAAAAAAAA (35) 14.9 0.0149 P10.5 crx- retina CATCCAGGTC 9.3 0.0093 P10.5 crx- retina AGGAACAGGA (4) 7.4 0.0074 P10.5 crx- retina AGCTCCAGGG (7) 3.7 0.0037 P10.5 crx- retina GGTGCTGAAT (3) 3.7 0.0037 P10.5 crx- retina AAGGAACAGA (3) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CCAAAAAAAA (35) 38.4 0.0384 P10.5 crx+ retina AGGAACAGGA (4) 7.7 0.0077 P10.5 crx+ retina CATCCAGGTC 3.8 0.0038 P10.5 crx+ retina GGTGCTGAAT (3) 3.8 0.0038 P10.5 crx+ retina GGGGTGGGGC (4) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CCAAAAAAAA (35) 35.2 0.0352 Adult retinal CATCCAGGTC 3.7 0.0037 Adult retinal AGGAACAGGA (4) 1.9 0.0019 Adult retinal GATCAGGTAA (3) 1.9 0.0019 Adult retinal GGTGCTGAAT (3) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCAAAAAAAA (35) 7.7 0.0077 ONL CATCCAGGTC 1.9 0.0019 ONL GGTGCTGAAT (3) 1.9 0.0019