Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.10508	Ssb	Sjogren syndrome antigen B	2	2 41.0 cM	20823
Gene Ontology	cytoplasm | nucleus | ribonucleoprotein complex | RNA binding | RNA processing | RNA-nucleus export
Human Homolog	SSB[Sjogren syndrome antigen B (autoantigen La)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGGAGGAC (4) 4.9 0.0049 P8 Cb GC ATTTATCACA (3) 3.3 0.0033 P8 Cb GC CTGACTTTAT 1.6 0.0016 P8 Cb GC CTGCCCGCCT (2) 1.6 0.0016 Cb medulloblastoma GAAGGAGGAC (4) 6.9 0.0069 Cb medulloblastoma GTGCAAAAAA (3) 4.6 0.0046 Cb medulloblastoma ATTTATCACA (3) 2.3 0.0023 Cb medulloblastoma ATTTTGCCTT 2.3 0.0023 Cb medulloblastoma GTGAAATAAA (2) 2.3 0.0023 P8 GC+1d culture GAAGGAGGAC (4) 6.8 0.0068 P8 GC+1d culture CAGCAGCTTT (4) 1.1 0.0011 P8 GC+1d culture CTGACTTTAT 1.1 0.0011 P8 GC+SHH+1d culture GAAGGAGGAC (4) 16.4 0.0164 P8 GC+SHH+1d culture TATAGTTCTG (2) 2.3 0.0023 P8 GC+SHH+1d culture ATTTATCACA (3) 1.2 0.0012 P8 GC+SHH+1d culture ATTTTGCCTT 1.2 0.0012 P8 GC+SHH+1d culture CTGACTTTAT 1.2 0.0012 3T3 fibroblasts ATTTATCACA (3) 3.5 0.0035 3T3 fibroblasts GAAGGAGGAC (4) 3.5 0.0035 3T3 fibroblasts GAAGTCAGTG 3.5 0.0035 E15 cortex AAAAGAGGAA (4) 4.9 0.0049 E15 cortex GAAGGAGGAC (4) 4.9 0.0049 P1 cortex AAAAGAGGAA (4) 9.1 0.0091 P1 cortex CTGACTTTAT 4.5 0.0045 P1 cortex GAAGTCAGTG 4.5 0.0045 Hypothalamus ATTTATCACA (3) 5.4 0.0054 Hypothalamus CAGCAGCTTT (4) 3.6 0.0036 Hypothalamus GAAGGAGGAC (4) 1.8 0.0018 E12.5 retina GAAGGAGGAC (4) 7.5 0.0075 E12.5 retina ATTTATCACA (3) 3.8 0.0038 E12.5 retina GTGAAATAAA (2) 1.9 0.0019 E12.5 retina GTGCAAAAAA (3) 1.9 0.0019 E12.5 retina TTCAAGAAAA (4) 1.9 0.0019 E14.5 retina GTGAAATAAA (2) 3.6 0.0036 E14.5 retina GAAGGAGGAC (4) 1.8 0.0018 E14.5 retina GTGAAATTAA (2) 1.8 0.0018 E16.5 retina GTGAAATTAA (2) 9.1 0.0091 E16.5 retina ATTTATCACA (3) 7.2 0.0072 E16.5 retina CAGGTGGAAG (4) 1.8 0.0018 E16.5 retina GAAGGAGGAC (4) 1.8 0.0018 E16.5 retina GAAGTCAGTG 1.8 0.0018 E16.5 retina TATAGTTCTG (2) 1.8 0.0018 E18.5 retina GAAGGAGGAC (4) 7.3 0.0073 E18.5 retina GTGAAATTAA (2) 5.5 0.0055 E18.5 retina AAACTGTCCT (3) 1.8 0.0018 E18.5 retina CTGACTTTAT 1.8 0.0018 P0.5 retina GAAGGAGGAC (4) 17.7 0.0177 P0.5 retina AAAAGAGGAA (4) 2 0.002 P0.5 retina ATTTATCACA (3) 2 0.002 P0.5 retina CAGGTGGAAG (4) 2 0.002 P2.5 retina GAAGGAGGAC (4) 5.3 0.0053 P2.5 retina GTGAAATTAA (2) 3.5 0.0035 P2.5 retina TATAGTTCTG (2) 3.5 0.0035 P2.5 retina CTGCCCGCCT (2) 1.8 0.0018 P4.5 retina GAAGGAGGAC (4) 5.9 0.0059 P4.5 retina AAAAGAGGAA (4) 2 0.002 P4.5 retina ATTTATCACA (3) 2 0.002 P4.5 retina CTGACTTTAT 2 0.002 P4.5 retina GTGAAATAAA (2) 2 0.002 P4.5 retina GTGAAATTAA (2) 2 0.002 P6.5 retina GAAGGAGGAC (4) 6.7 0.0067 P6.5 retina AAACTGTCCT (3) 1.7 0.0017 P6.5 retina ATTTATCACA (3) 1.7 0.0017 P6.5 retina CTGACTTTAT 1.7 0.0017 P6.5 retina GTGAAATTAA (2) 1.7 0.0017 P10.5 crx- retina GAAGGAGGAC (4) 7.4 0.0074 P10.5 crx- retina AAACTGTCCT (3) 1.9 0.0019 P10.5 crx- retina ATTTTGCCTT 1.9 0.0019 P10.5 crx- retina CTGCCCGCCT (2) 1.9 0.0019 P10.5 crx+ retina GAAGGAGGAC (4) 9.6 0.0096 P10.5 crx+ retina CTGACTTTAT 7.7 0.0077 P10.5 crx+ retina AAACTGTCCT (3) 1.9 0.0019 P10.5 crx+ retina CTGCCCGCCT (2) 1.9 0.0019 P10.5 crx+ retina TTCAAGAAAA (4) 1.9 0.0019 Adult retinal CTGACTTTAT 7.4 0.0074 Adult retinal GAAGGAGGAC (4) 7.4 0.0074 Adult retinal AAAAGAGGAA (4) 5.6 0.0056 Adult retinal ATTTATCACA (3) 5.6 0.0056 Adult retinal CTGCCCGCCT (2) 1.9 0.0019 ONL GAAGGAGGAC (4) 3.8 0.0038 ONL AAAAGAGGAA (4) 1.9 0.0019 ONL ATTTATCACA (3) 1.9 0.0019 ONL CAGCAGCTTT (4) 1.9 0.0019 ONL GTGAAATAAA (2) 1.9 0.0019