Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.10801
Stra6
stimulated by retinoic acid gene 6
9
20897
Gene Ontology
integral to membrane
Human Homolog
FLJ12541[stimulated by retinoic acid gene 6]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 33 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAGAAAAAA (
15
)
11.4
0.0114
P8 Cb GC
AAAGAAGTTA
(
4
)
3.3
0.0033
P8 Cb GC
TGCCTGCCTC
(
4
)
3.3
0.0033
Cb medulloblastoma
AAAGAAAAAA (
15
)
13.9
0.0139
Cb medulloblastoma
TGCCTGCCTC
(
4
)
2.3
0.0023
P8 GC+1d culture
AAAGAAAAAA (
15
)
8
0.008
P8 GC+1d culture
TGCCTGCCTC
(
4
)
3.4
0.0034
P8 GC+SHH+1d culture
AAAGAAAAAA (
15
)
12.9
0.0129
P8 GC+SHH+1d culture
TGCCTGCCTC
(
4
)
5.9
0.0059
P8 GC+SHH+1d culture
AAAGAAGTTA
(
4
)
1.2
0.0012
E15 cortex
AAAGAAAAAA (
15
)
4.9
0.0049
P1 cortex
AAAGAAAAAA (
15
)
9.1
0.0091
Hypothalamus
AAAGAAAAAA (
15
)
9.1
0.0091
Hypothalamus
TGCCTGCCTC
(
4
)
1.8
0.0018
E12.5 retina
AAAGAAGTTA
(
4
)
9.4
0.0094
E12.5 retina
CCACATATGT
1.9
0.0019
E16.5 retina
AAAGAAAAAA (
15
)
3.6
0.0036
E18.5 retina
AAAGAAAAAA (
15
)
10.9
0.0109
E18.5 retina
TGCCTGCCTC
(
4
)
1.8
0.0018
P0.5 retina
AAAGAAAAAA (
15
)
7.9
0.0079
P2.5 retina
AAAGAAAAAA (
15
)
8.8
0.0088
P4.5 retina
AAAGAAAAAA (
15
)
5.9
0.0059
P4.5 retina
CCACATATGT
2
0.002
P4.5 retina
TGCCTGCCTC
(
4
)
2
0.002
P6.5 retina
AAAGAAAAAA (
15
)
10
0.01
P6.5 retina
AAAGAAGTTA
(
4
)
1.7
0.0017
P10.5 crx- retina
CCACATATGT
1.9
0.0019
P10.5 crx- retina
TGCCTGCCTC
(
4
)
1.9
0.0019
P10.5 crx+ retina
AAAGAAGTTA
(
4
)
3.8
0.0038
P10.5 crx+ retina
TGCCTGCCTC
(
4
)
1.9
0.0019
Adult retinal
AAAGAAGTTA
(
4
)
1.9
0.0019
ONL
AAAGAAAAAA (
15
)
5.7
0.0057
ONL
AAAGAAGTTA
(
4
)
3.8
0.0038
