Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.114116	8430408E17Rik	RIKEN cDNA 8430408E17 gene	10		71464
Mm.114116	Ddx50	DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	10		94213
Gene Ontology	ATP binding | helicase activity | hydrolase activity
Human Homolog	DDX50[DEAD (Asp-Glu-Ala-Asp) box polypeptide 50]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC AGATCCAGAT (4) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TATATTATTC (3) 3.4 0.0034 P8 GC+1d culture AGATCCAGAT (4) 1.1 0.0011 P8 GC+1d culture ATTAGACAGA (6) 1.1 0.0011 P8 GC+1d culture GGAGCGAAAA (7) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CCCAAAAAAA (19) 3.5 0.0035 P8 GC+SHH+1d culture TATATTATTC (3) 2.3 0.0023 P8 GC+SHH+1d culture GGAGCGAAAA (7) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts AGATCCAGAT (4) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex ATTGGGTAAT (2) 4.9 0.0049 E15 cortex CCCAAAAAAA (19) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TATATTATTC (3) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TATATTATTC (3) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GGAGCGAAAA (7) 3.8 0.0038 E12.5 retina TATATTATTC (3) 3.8 0.0038 E12.5 retina ATAAGACAGA (3) 1.9 0.0019 E12.5 retina ATTGGGTAAT (2) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina ATTAGACAGA (6) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CCCAAAAAAA (19) 1.8 0.0018 E16.5 retina TATATTATTC (3) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CCCAAAAAAA (19) 3.6 0.0036 E18.5 retina TATATTATTC (3) 3.6 0.0036 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina ATAAGACAGA (3) 3.9 0.0039 P0.5 retina ATTAGACAGA (6) 2 0.002 P0.5 retina CCCAAAAAAA (19) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina AGATCCAGAT (4) 1.8 0.0018 P2.5 retina CCCAAAAAAA (19) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CCCAAAAAAA (19) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CCCAAAAAAA (19) 3.3 0.0033 P6.5 retina ATTAGACAGA (6) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina AGATCCAGAT (4) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina ATTAGACAGA (6) 3.8 0.0038 P10.5 crx+ retina AGATCCAGAT (4) 1.9 0.0019 P10.5 crx+ retina ATTGGGTAAT (2) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal AGATCCAGAT (4) 1.9 0.0019 Adult retinal ATTAGACAGA (6) 1.9 0.0019 Adult retinal CCCAAAAAAA (19) 1.9 0.0019 Adult retinal TATATTATTC (3) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL AGATCCAGAT (4) 3.8 0.0038 ONL ATTAGACAGA (6) 1.9 0.0019 ONL CCCAAAAAAA (19) 1.9 0.0019