Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.11480	Bxdc1	brix domain containing 1	10		67239
Gene Ontology	nucleus
Human Homolog	BXDC1[brix domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCACACACA (29) 8.2 0.0082 P8 Cb GC TGGGTGCTGG (64) 8.2 0.0082 P8 Cb GC AAAGTGCCCA (4) 1.6 0.0016 P8 Cb GC TATGTCACAG 1.6 0.0016 Cb medulloblastoma TGGGTGCTGG (64) 9.2 0.0092 Cb medulloblastoma TGCACACACA (29) 2.3 0.0023 P8 GC+1d culture TGCACACACA (29) 9.1 0.0091 P8 GC+1d culture TGGGTGCTGG (64) 5.7 0.0057 P8 GC+1d culture AAAGTGCCCA (4) 1.1 0.0011 P8 GC+1d culture TATGCACTGA 1.1 0.0011 P8 GC+1d culture TATGTCACAG 1.1 0.0011 P8 GC+SHH+1d culture TGCACACACA (29) 16.4 0.0164 P8 GC+SHH+1d culture TGGGTGCTGG (64) 3.5 0.0035 P8 GC+SHH+1d culture TTGGGCTCCC (3) 1.2 0.0012 3T3 fibroblasts TGGGTGCTGG (64) 17.5 0.0175 3T3 fibroblasts TGCACACACA (29) 14 0.014 E15 cortex TGGGTGCTGG (64) 14.8 0.0148 E15 cortex AAAGTGCCCA (4) 4.9 0.0049 P1 cortex TGGGTGCTGG (64) 13.6 0.0136 P1 cortex TGCACACACA (29) 4.5 0.0045 Hypothalamus TGGGTGCTGG (64) 9.1 0.0091 Hypothalamus TGCACACACA (29) 1.8 0.0018 E12.5 retina TGGGTGCTGG (64) 9.4 0.0094 E12.5 retina TATGTCACAG 5.6 0.0056 E12.5 retina TGCACACACA (29) 5.6 0.0056 E12.5 retina TTGGGCTCCC (3) 1.9 0.0019 E14.5 retina TGGGTGCTGG (64) 54.7 0.0547 E14.5 retina TGCACACACA (29) 9.1 0.0091 E14.5 retina TTGGGCTCCC (3) 1.8 0.0018 E16.5 retina TGGGTGCTGG (64) 41.7 0.0417 E16.5 retina TGCACACACA (29) 9.1 0.0091 E18.5 retina TGGGTGCTGG (64) 20 0.02 E18.5 retina TGCACACACA (29) 7.3 0.0073 E18.5 retina AAAGTGCCCA (4) 1.8 0.0018 E18.5 retina TTGGGCTCCC (3) 1.8 0.0018 P0.5 retina TGGGTGCTGG (64) 11.8 0.0118 P0.5 retina AAAGTGCCCA (4) 7.9 0.0079 P0.5 retina TGCACACACA (29) 2 0.002 P2.5 retina TGGGTGCTGG (64) 17.6 0.0176 P2.5 retina TGCACACACA (29) 3.5 0.0035 P4.5 retina TGGGTGCTGG (64) 9.9 0.0099 P4.5 retina TGCACACACA (29) 2 0.002 P4.5 retina TTGGGCTCCC (3) 2 0.002 P6.5 retina TGGGTGCTGG (64) 13.3 0.0133 P6.5 retina TGCACACACA (29) 11.7 0.0117 P6.5 retina TTGGGCTCCC (3) 1.7 0.0017 P10.5 crx- retina TGGGTGCTGG (64) 20.4 0.0204 P10.5 crx- retina TGCACACACA (29) 3.7 0.0037 P10.5 crx- retina TATGCACTGA 1.9 0.0019 P10.5 crx- retina TTGGGCTCCC (3) 1.9 0.0019 P10.5 crx+ retina TGGGTGCTGG (64) 15.4 0.0154 P10.5 crx+ retina TGCACACACA (29) 9.6 0.0096 P10.5 crx+ retina AAAGTGCCCA (4) 1.9 0.0019 P10.5 crx+ retina TATGTCACAG 1.9 0.0019 P10.5 crx+ retina TTGGGCTCCC (3) 1.9 0.0019 Adult retinal TGGGTGCTGG (64) 13 0.013 Adult retinal TGCACACACA (29) 9.3 0.0093 Adult retinal TATGCACTGA 1.9 0.0019 ONL TGGGTGCTGG (64) 40.2 0.0402 ONL TGCACACACA (29) 15.3 0.0153