Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.11535
Wdr23
WD repeat domain 23
14
14 24.5 cM
28199
Mm.11535
A730061H03Rik
RIKEN cDNA A730061H03 gene
14
320942
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACAGTGCCTG
(
5
)
11.4
0.0114
P8 Cb GC
ATTAAACACA (
4
)
1.6
0.0016
P8 Cb GC
TCTGCTTTGC (
3
)
1.6
0.0016
Cb medulloblastoma
ACAGTGCCTG
(
5
)
9.2
0.0092
P8 GC+1d culture
ACAGTGCCTG
(
5
)
14.8
0.0148
P8 GC+1d culture
TTCTGATGTT
(
3
)
5.7
0.0057
P8 GC+1d culture
TCTGCTTTGC (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
ACAGTGCCTG
(
5
)
8.2
0.0082
P8 GC+SHH+1d culture
ATTAAACACA (
4
)
2.3
0.0023
3T3 fibroblasts
ACAGTGCCTG
(
5
)
3.5
0.0035
E15 cortex
ACAGTGCCTG
(
5
)
4.9
0.0049
E15 cortex
GCAAAACTGA (
6
)
4.9
0.0049
P1 cortex
ACAGTGCCTG
(
5
)
4.5
0.0045
P1 cortex
ATTAAACACA (
4
)
4.5
0.0045
P1 cortex
GCAAAACTGA (
6
)
4.5
0.0045
Hypothalamus
ACAGTGCCTG
(
5
)
10.9
0.0109
E12.5 retina
ACAGTGCCTG
(
5
)
13.1
0.0131
E12.5 retina
TTCTGATGTT
(
3
)
5.6
0.0056
E14.5 retina
ACAGTGCCTG
(
5
)
10.9
0.0109
E14.5 retina
ATTAAACACA (
4
)
3.6
0.0036
E16.5 retina
ACAGTGCCTG
(
5
)
10.9
0.0109
E16.5 retina
ATTAAACACA (
4
)
1.8
0.0018
E16.5 retina
TTCTGATGTT
(
3
)
1.8
0.0018
E18.5 retina
ACAGTGCCTG
(
5
)
14.6
0.0146
E18.5 retina
TCTGCTTTGC (
3
)
1.8
0.0018
P0.5 retina
ACAGTGCCTG
(
5
)
9.8
0.0098
P0.5 retina
TTCTGATGTT
(
3
)
3.9
0.0039
P2.5 retina
ACAGTGCCTG
(
5
)
14.1
0.0141
P2.5 retina
ATTAAACACA (
4
)
1.8
0.0018
P4.5 retina
ACAGTGCCTG
(
5
)
13.9
0.0139
P4.5 retina
ATTAAACACA (
4
)
2
0.002
P4.5 retina
TTCTGATGTT
(
3
)
2
0.002
P6.5 retina
ACAGTGCCTG
(
5
)
16.7
0.0167
P6.5 retina
ATTAAACACA (
4
)
5
0.005
P6.5 retina
TCTGCTTTGC (
3
)
1.7
0.0017
P10.5 crx- retina
TTCTGATGTT
(
3
)
13
0.013
P10.5 crx- retina
ACAGTGCCTG
(
5
)
7.4
0.0074
P10.5 crx- retina
ATTAAACACA (
4
)
1.9
0.0019
P10.5 crx+ retina
ACAGTGCCTG
(
5
)
21.1
0.0211
P10.5 crx+ retina
GCAAAACTGA (
6
)
3.8
0.0038
P10.5 crx+ retina
ATTAAACACA (
4
)
1.9
0.0019
Adult retinal
TTCTGATGTT
(
3
)
5.6
0.0056
Adult retinal
ACAGTGCCTG
(
5
)
1.9
0.0019
Adult retinal
TCTGCTTTGC (
3
)
1.9
0.0019
ONL
ACAGTGCCTG
(
5
)
1.9
0.0019
ONL
GCAAAACTGA (
6
)
1.9
0.0019
ONL
TCTGCTTTGC (
3
)
1.9
0.0019
