Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.116418
A730008L03Rik
RIKEN cDNA A730008L03 gene
2
58202
Gene Ontology
nucleus
|
regulation of transcription, DNA-dependent
Human Homolog
COBRA1[cofactor of BRCA1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 46 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTAACTGAGA
1.6
0.0016
Cb medulloblastoma
GACTCAGCTC (
3
)
4.6
0.0046
Cb medulloblastoma
CTAACTGAGA
2.3
0.0023
P8 GC+1d culture
CTAACTGAGA
5.7
0.0057
P8 GC+1d culture
GACTCACTCA (
3
)
3.4
0.0034
P8 GC+1d culture
GGCTGGGGGA (
3
)
1.1
0.0011
P8 GC+1d culture
TCTTTGGCAG (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CTAACTGAGA
4.7
0.0047
P8 GC+SHH+1d culture
GACTCAGCTC (
3
)
1.2
0.0012
3T3 fibroblasts
CTAACTGAGA
7
0.007
E15 cortex
CTAACTGAGA
4.9
0.0049
E15 cortex
GACTCAGCTC (
3
)
4.9
0.0049
Hypothalamus
GACTCAGTCA
1.8
0.0018
E12.5 retina
CTAACTGAGA
5.6
0.0056
E12.5 retina
GACTCACTCA (
3
)
1.9
0.0019
E14.5 retina
GACTCAGTCA
7.3
0.0073
E14.5 retina
CTAACTGAGA
1.8
0.0018
E16.5 retina
CTAACTGAGA
5.4
0.0054
E16.5 retina
GACTCACTCA (
3
)
1.8
0.0018
E16.5 retina
GACTCAGCTC (
3
)
1.8
0.0018
E16.5 retina
GACTCAGTCA
1.8
0.0018
P0.5 retina
CTAACTGAGA
3.9
0.0039
P0.5 retina
GACTCACTCA (
3
)
2
0.002
P2.5 retina
GACTCACTCA (
3
)
1.8
0.0018
P2.5 retina
GACTCAGCTC (
3
)
1.8
0.0018
P2.5 retina
GGCTGGGGGA (
3
)
1.8
0.0018
P2.5 retina
TCTTTGGCAG (
2
)
1.8
0.0018
P4.5 retina
CTAACTGAGA
2
0.002
P6.5 retina
CTAACTGAGA
8.3
0.0083
P6.5 retina
TCTTTGGCAG (
2
)
3.3
0.0033
P6.5 retina
GACTCACTCA (
3
)
1.7
0.0017
P10.5 crx- retina
CTAACTGAGA
9.3
0.0093
P10.5 crx- retina
GACTCAGCTC (
3
)
5.6
0.0056
P10.5 crx- retina
TCTTTGGCAG (
2
)
3.7
0.0037
P10.5 crx+ retina
GACTCAGCTC (
3
)
3.8
0.0038
P10.5 crx+ retina
CTAACTGAGA
1.9
0.0019
P10.5 crx+ retina
GTGCTGGAGT (
6
)
1.9
0.0019
Adult retinal
GACTCACTCA (
3
)
3.7
0.0037
Adult retinal
GACTCAGCTC (
3
)
3.7
0.0037
Adult retinal
CTAACTGAGA
1.9
0.0019
Adult retinal
TCTTTGGCAG (
2
)
1.9
0.0019
ONL
CTAACTGAGA
1.9
0.0019
ONL
GACTCAGCTC (
3
)
1.9
0.0019
ONL
GGCTGGGGGA (
3
)
1.9
0.0019
ONL
GTGCTGGAGT (
6
)
1.9
0.0019
ONL
TCTTTGGCAG (
2
)
1.9
0.0019